RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 PSMD12O00232 456 aaPredicted RBP9.71□□□□□ -0.86
VPS4B-207ENST00000591519 ADAM10O14672 748 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 H2AFYO75367 372 aaKnown RBP9.71□□□□□ -0.86
VPS4B-207ENST00000591519 FAM155BO75949 473 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 CLDN14O95500 239 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 C1GALT1C1LP0DN25 315 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 COX6B1P14854 86 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 GNAZP19086 355 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 MAOAP21397 527 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 GSTM2P28161 218 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 GGT5P36269 586 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 HNF4AP41235 474 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 SLC6A12P48065 614 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 HSD17B7P56937 341 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 TAS2R39P59534 338 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 STXBP1P61764 594 aaKnown RBP9.71□□□□□ -0.86
VPS4B-207ENST00000591519 RUNX2Q13950 521 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 RBBP5Q15291 538 aaKnown RBP9.71□□□□□ -0.86
VPS4B-207ENST00000591519 CDSNQ15517 529 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 GLE1Q53GS7 698 aaKnown RBP9.71□□□□□ -0.86
VPS4B-207ENST00000591519 TEX35Q5T0J7 233 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 SLCO4C1Q6ZQN7 724 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 GDF7Q7Z4P5 450 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 FGD2Q7Z6J4 655 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 SCUBE1Q8IWY4 988 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 PPM1NQ8N819 430 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 B3GNT7Q8NFL0 401 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 TTLQ8NG68 377 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 UHMK1Q8TAS1 419 aaKnown RBP9.71□□□□□ -0.86
VPS4B-207ENST00000591519 FBF1Q8TES7 1133 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 ANKRD49Q8WVL7 239 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 CDKL2Q92772 493 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 MTFMTQ96DP5 389 aaKnown RBP9.71□□□□□ -0.86
VPS4B-207ENST00000591519 MS4A6EQ96DS6 147 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 DMRTA2Q96SC8 542 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 VKORC1Q9BQB6 163 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 CAPS2Q9BXY5 557 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 DEFB126Q9BYW3 111 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 TRIM8Q9BZR9 551 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 TSPAN10Q9H1Z9 355 aaPredicted RBP9.71□□□□□ -0.86
VPS4B-207ENST00000591519 POPDC3Q9HBV1 291 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 TXNDC16Q9P2K2 825 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 SH3BGRL2Q9UJC5 107 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 KLF13Q9Y2Y9 288 aaPredicted RBP9.71□□□□□ -0.86
VPS4B-207ENST00000591519 CLDN16Q9Y5I7 305 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 FBN2P35556 2912 aa9.71□□□□□ -0.86
VPS4B-207ENST00000591519 SYNDIG1LA6NDD5 238 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 FAM159BA6NKW6 160 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 C4orf51C9J302 202 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 KLRC4-KLRK1H3BQV0 150 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 CLDN4O14493 209 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 FCHO1O14526 889 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 WISP3O95389 354 aaPredicted RBP9.7□□□□□ -0.86
VPS4B-207ENST00000591519 ACSL3O95573 720 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 ZNF24P17028 368 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 POU3F2P20265 443 aaPredicted RBP9.7□□□□□ -0.86
VPS4B-207ENST00000591519 KIR3DL1P43629 444 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 RNF144AP50876 292 aaPredicted RBP9.7□□□□□ -0.86
VPS4B-207ENST00000591519 CLCN2P51788 898 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 SLC12A2P55011 1212 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 BTN3A2P78410 334 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 UAP1Q16222 522 aaPredicted RBP9.7□□□□□ -0.86
VPS4B-207ENST00000591519 ADPRMQ3LIE5 342 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 KBTBD12Q3ZCT8 623 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 TOR1AIP1Q5JTV8 583 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 CDKL4Q5MAI5 379 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 TMIGD1Q6UXZ0 262 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 CYS1Q717R9 158 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 TMPRSS11BQ86T26 416 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 ADAMTSL2Q86TH1 951 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 CEP97Q8IW35 865 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 SULF2Q8IWU5 870 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 GSPT2Q8IYD1 628 aaKnown RBP9.7□□□□□ -0.86
VPS4B-207ENST00000591519 EID3Q8N140 333 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 CPSF7Q8N684 471 aaKnown RBP9.7□□□□□ -0.86
VPS4B-207ENST00000591519 ZFP62Q8NB50 900 aaPredicted RBP9.7□□□□□ -0.86
VPS4B-207ENST00000591519 AGAP11Q8TF27 550 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 GAL3ST3Q96A11 431 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 TMEM125Q96AQ2 219 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 RHBDF1Q96CC6 855 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 VPS39Q96JC1 886 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 QRFPRQ96P65 431 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 FMO2Q99518 471 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 SPOCK3Q9BQ16 436 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 ENKD1Q9H0I2 346 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 EHD1Q9H4M9 534 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 CAB39LQ9H9S4 337 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 NINJ2Q9NZG7 142 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 GPRC5BQ9NZH0 403 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 NFU1Q9UMS0 254 aa9.7□□□□□ -0.86
VPS4B-207ENST00000591519 MTO1Q9Y2Z2 717 aaKnown RBP9.7□□□□□ -0.86
VPS4B-207ENST00000591519 OTOGQ6ZRI0 2925 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 C19orf84I3L1E1 186 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 CYR61O00622 381 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 PRRG2O14669 202 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 CLEC3AO75596 197 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 TBX6O95947 436 aaPredicted RBP9.69□□□□□ -0.86
VPS4B-207ENST00000591519 ABOP16442 354 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 TFEBP19484 476 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 ECHS1P30084 290 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms