RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 LHX9Q9NQ69 397 aa15.72■□□□□ 0.11
GCDH-213ENST00000590627 PRDM7Q9NQW5 492 aa15.72■□□□□ 0.11
GCDH-213ENST00000590627 GIMAP2Q9UG22 337 aa15.72■□□□□ 0.11
GCDH-213ENST00000590627 HYKKA2RU49 373 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 CYSRT1A8MQ03 144 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 ERI3O43414 337 aaKnown RBP15.71■□□□□ 0.11
GCDH-213ENST00000590627 SH3BGRLO75368 114 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 SCELO95171 688 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 FGF5P12034 268 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 ALOX12P18054 663 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 BSGP35613 385 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 RAP1GDS1P52306 607 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 IRX1P78414 480 aaPredicted RBP15.71■□□□□ 0.11
GCDH-213ENST00000590627 SF3A3Q12874 501 aaKnown RBP eCLIP15.71■□□□□ 0.111e-6■■■■■ 30.1
GCDH-213ENST00000590627 FAM53BQ14153 422 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 HERC3Q15034 1050 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 NDUFA9Q16795 377 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 FAM214AQ32MH5 1076 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 GALNTL6Q49A17 601 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 CRTC2Q53ET0 693 aaPredicted RBP15.71■□□□□ 0.11
GCDH-213ENST00000590627 NXNQ6DKJ4 435 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 OR4C11Q6IEV9 310 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 NIPAL1Q6NVV3 410 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 TRIM40Q6P9F5 258 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 COMMD6Q7Z4G1 85 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 GPR135Q8IZ08 494 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 TTC29Q8NA56 475 aaPredicted RBP15.71■□□□□ 0.11
GCDH-213ENST00000590627 FNDC5Q8NAU1 212 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 RILPQ96NA2 401 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 QRFPRQ96P65 431 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 OR6C1Q96RD1 312 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 ROGDIQ9GZN7 287 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 DDX31Q9H8H2 851 aaKnown RBP15.71■□□□□ 0.11
GCDH-213ENST00000590627 RARRES3Q9UL19 164 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 TRIM33Q9UPN9 1127 aa15.71■□□□□ 0.11
GCDH-213ENST00000590627 LOC101059948A0A1B0GTJ6 334 aa15.7■□□□□ 0.1
GCDH-213ENST00000590627 C4orf51C9J302 202 aa15.7■□□□□ 0.1
GCDH-213ENST00000590627 SAP18O00422 153 aaKnown RBP15.7■□□□□ 0.1
GCDH-213ENST00000590627 POLR1CO15160 346 aaPredicted RBP15.7■□□□□ 0.1
GCDH-213ENST00000590627 UBDO15205 165 aa15.7■□□□□ 0.1
GCDH-213ENST00000590627 STK17BO94768 372 aa15.7■□□□□ 0.1
GCDH-213ENST00000590627 ZNF888P0CJ79 500 aaPredicted RBP15.7■□□□□ 0.1
GCDH-213ENST00000590627 MAPK1P28482 360 aa15.7■□□□□ 0.1
GCDH-213ENST00000590627 MRPL19P49406 292 aaKnown RBP15.7■□□□□ 0.1
GCDH-213ENST00000590627 PLA2G16P53816 162 aa15.7■□□□□ 0.1
GCDH-213ENST00000590627 RPL38P63173 70 aaKnown RBP15.7■□□□□ 0.1
GCDH-213ENST00000590627 RAE1P78406 368 aaKnown RBP15.7■□□□□ 0.1
GCDH-213ENST00000590627 MC1RQ01726 317 aa15.7■□□□□ 0.1
GCDH-213ENST00000590627 CDC20Q12834 499 aa15.7■□□□□ 0.1
GCDH-213ENST00000590627 MAP7Q14244 749 aa15.7■□□□□ 0.1
GCDH-213ENST00000590627 NOXRED1Q6NXP6 359 aa15.7■□□□□ 0.1
GCDH-213ENST00000590627 PAGE2Q7Z2X7 111 aa15.7■□□□□ 0.1
GCDH-213ENST00000590627 TIPARPQ7Z3E1 657 aaKnown RBP15.7■□□□□ 0.1
GCDH-213ENST00000590627 NUDT13Q86X67 352 aa15.7■□□□□ 0.1
GCDH-213ENST00000590627 ZCCHC7Q8N3Z6 543 aaKnown RBP15.7■□□□□ 0.1
GCDH-213ENST00000590627 CCDC197Q8NCU1 140 aa15.7■□□□□ 0.1
GCDH-213ENST00000590627 C10orf90Q96M02 699 aa15.7■□□□□ 0.1
GCDH-213ENST00000590627 CTRCQ99895 268 aa15.7■□□□□ 0.1
GCDH-213ENST00000590627 C17orf62Q9BQA9 187 aa15.7■□□□□ 0.1
GCDH-213ENST00000590627 NOP53Q9NZM5 478 aaKnown RBP15.7■□□□□ 0.1
GCDH-213ENST00000590627 MCM8Q9UJA3 840 aa15.7■□□□□ 0.1
GCDH-213ENST00000590627 ANAPC2Q9UJX6 822 aa15.7■□□□□ 0.1
GCDH-213ENST00000590627 MRPS2Q9Y399 296 aaKnown RBP15.7■□□□□ 0.1
GCDH-213ENST00000590627 COL12A1Q99715 3063 aa15.7■□□□□ 0.1
GCDH-213ENST00000590627 A0A088AWK7 358 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 A0A0A6YYD5 115 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 E9PBE3 544 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 NKX2-8O15522 239 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 KLHL41O60662 606 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 MYO1DO94832 1006 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 DLGAP3O95886 979 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 ALDOCP09972 364 aaKnown RBP15.69■□□□□ 0.1
GCDH-213ENST00000590627 PRPS2P11908 318 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 BCKDHAP12694 445 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 ZNF10P21506 573 aaPredicted RBP15.69■□□□□ 0.1
GCDH-213ENST00000590627 HIST1H1TP22492 207 aaPredicted RBP15.69■□□□□ 0.1
GCDH-213ENST00000590627 ATP5A1P25705 553 aaKnown RBP15.69■□□□□ 0.1
GCDH-213ENST00000590627 TIA1P31483 386 aaKnown RBP eCLIP15.69■□□□□ 0.1
GCDH-213ENST00000590627 ARSFP54793 590 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 RAB8AP61006 207 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 SNRPNP63162 240 aaKnown RBP15.69■□□□□ 0.1
GCDH-213ENST00000590627 FOXM1Q08050 763 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 GSTA3Q16772 222 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 MUM1Q2TAK8 710 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.69■□□□□ 0.1
GCDH-213ENST00000590627 IL23RQ5VWK5 629 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 TMEM198Q66K66 360 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 ZNF793Q6ZN11 406 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 PTRH1Q86Y79 214 aaKnown RBP15.69■□□□□ 0.1
GCDH-213ENST00000590627 ESX1Q8N693 406 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 MVB12AQ96EY5 273 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 SERINC2Q96SA4 455 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 SORBS1Q9BX66 1292 aaKnown RBP15.69■□□□□ 0.1
GCDH-213ENST00000590627 ZNF385DQ9H6B1 395 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 CLK4Q9HAZ1 481 aaKnown RBP15.69■□□□□ 0.1
GCDH-213ENST00000590627 APMAPQ9HDC9 416 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 AIG1Q9NVV5 245 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 IRAK4Q9NWZ3 460 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 HEY2Q9UBP5 337 aa15.69■□□□□ 0.1
GCDH-213ENST00000590627 SRPK3Q9UPE1 567 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms