RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 PAPSS1O43252 624 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC37A4O43826 429 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 ATP9AO75110 1047 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 CXCL14O95715 111 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 ASS1P00966 412 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 RFPL3SP0C7P2 107 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM200BP0CF97 657 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 FGF3P11487 239 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 MYOGP15173 224 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 BDKRB2P30411 391 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 CD52P31358 61 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 ASMTP46597 345 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 PLK1P53350 603 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 STARD6P59095 220 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 BEX3Q00994 111 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 RAD51Q06609 339 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 KLHL30Q0D2K2 578 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 SNRNP35Q16560 246 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 HADHQ16836 314 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 HYAL4Q2M3T9 481 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF699Q32M78 642 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 PLK5Q496M5 336 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 SYTL3Q4VX76 610 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 MPPE1Q53F39 396 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 TMEM35AQ53FP2 167 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 ESCO2Q56NI9 601 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 TCEAL5Q5H9L2 206 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 RNASEH2BQ5TBB1 312 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 DDI2Q5TDH0 399 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 C9orf57Q5W0N0 161 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 DUS1LQ6P1R4 473 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 ISLR2Q6UXK2 745 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 BCDIN3DQ7Z5W3 292 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 COMMD2Q86X83 199 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 RNF10Q8N5U6 811 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 CFAP61Q8NHU2 1237 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 CCDC107Q8WV48 283 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 ARNTL2Q8WYA1 636 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 NTAN1Q96AB6 310 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 TMEM159Q96B96 161 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM111AQ96PZ2 611 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 SIGLEC11Q96RL6 698 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 ACOX2Q99424 681 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 VAT1Q99536 393 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 MTERF1Q99551 399 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 DENND2DQ9H6A0 471 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 CATSPERBQ9H7T0 1116 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 SCPEP1Q9HB40 452 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 Q9N2J8 555 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 FARSBQ9NSD9 589 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 RAB23Q9ULC3 237 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 PCDHA7Q9UN72 937 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 KCNJ14Q9UNX9 436 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 SNX9Q9Y5X1 595 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 TDRD15B5MCY1 1934 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 MTCL1Q9Y4B5 1905 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 MYH11P35749 1972 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 VCANP13611 3396 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 PLXNA4Q9HCM2 1894 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 SMIM28A0A1B0GU29 152 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 C17orf100A8MU93 164 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 HSPB6O14558 160 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 ADAMDEC1O15204 470 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 RNASEH1O60930 286 aaKnown RBP1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 BMP10O95393 424 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 OLFM2O95897 454 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 IGHEP01854 428 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 APOEP02649 317 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 CYC1P08574 325 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 HOXC4P09017 264 aaPredicted RBP1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM58BPP0C7Q3 252 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF286BP0CG31 522 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 EPORP19235 508 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 SERPINB6P35237 376 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 CYLC1P35663 651 aaPredicted RBP1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 TKTL1P51854 596 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 PDE1BQ01064 536 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 ABRQ12979 859 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 ILKQ13418 452 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 GPR18Q14330 331 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 ZCWPW2Q504Y3 356 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 RNASE12Q5GAN4 147 aaKnown RBP1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 PDPK2PQ6A1A2 396 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 LCLAT1Q6UWP7 414 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 RBM44Q6ZP01 1051 aaKnown RBP1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 PQLC2Q6ZP29 291 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 CROCCP2Q86T23 111 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 GLCCI1Q86VQ1 547 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 ZC3HC1Q86WB0 502 aaKnown RBP1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 EFCAB13Q8IY85 973 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF619Q8N2I2 560 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 DENND6BQ8NEG7 585 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 NSMAFQ92636 917 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 SMARCD2Q92925 531 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 PEX13Q92968 403 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 ISG20Q96AZ6 181 aaKnown RBP1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 PPP1R16AQ96I34 528 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 HPDLQ96IR7 371 aa1.82□□□□□ -2.12
SMCHD1-211ENST00000584897 TXNDC15Q96J42 360 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms