RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 B4GALT2O60909 372 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 ZWINTO95229 277 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 MLYCDO95822 493 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 SMIM10L1P0DMW3 83 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 ESRRAP11474 423 aaPredicted RBP10.41□□□□□ -0.74
CCDC47-206ENST00000584112 NCF1P14598 390 aaPredicted RBP10.41□□□□□ -0.74
CCDC47-206ENST00000584112 CD46P15529 392 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 SPRP35270 261 aaPredicted RBP10.41□□□□□ -0.74
CCDC47-206ENST00000584112 GGT5P36269 586 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 MRPS25P82663 173 aaKnown RBP10.41□□□□□ -0.74
CCDC47-206ENST00000584112 C2orf54Q08AI8 447 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 HYAL2Q12891 473 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 TUBA3CQ13748 450 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 SLBPQ14493 270 aaKnown RBP eCLIP10.41□□□□□ -0.74
CCDC47-206ENST00000584112 C3AR1Q16581 482 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.41□□□□□ -0.741e-10■■■■□ 21
CCDC47-206ENST00000584112 TOR1AIP1Q5JTV8 583 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 FCRLBQ6BAA4 426 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 SULT1C3Q6IMI6 304 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 TUBA3EQ6PEY2 450 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 SLCO4C1Q6ZQN7 724 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 C3orf62Q6ZUJ4 267 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.41□□□□□ -0.742e-6■■■■■ 34.8
CCDC47-206ENST00000584112 SHISA5Q8N114 240 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 TMEM178AQ8NBL3 297 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 ELP5Q8TE02 316 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 CREB3L4Q8TEY5 395 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 SMIM10Q96HG1 83 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 COX4I2Q96KJ9 171 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 NPLQ9BXD5 320 aaPredicted RBP10.41□□□□□ -0.74
CCDC47-206ENST00000584112 EHD1Q9H4M9 534 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 KLHL31Q9H511 634 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 NT5DC2Q9H857 520 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 CAB39LQ9H9S4 337 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 PRDM9Q9NQV7 894 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 DNAJC11Q9NVH1 559 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 GRHL1Q9NZI5 618 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 SEC14L3Q9UDX4 400 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 TINAGQ9UJW2 476 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 MMACHCQ9Y4U1 282 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 RYR3Q15413 4870 aa10.41□□□□□ -0.74
CCDC47-206ENST00000584112 PHF3Q92576 2039 aaKnown RBP10.4□□□□□ -0.74
CCDC47-206ENST00000584112 TCRBV16S1A1N1A0A5B0 115 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 SYNDIG1LA6NDD5 238 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 ANKDD1BA6NHY2 528 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 SAGE2PA6NJ88 616 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 FAM159BA6NKW6 160 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 GABRR3A8MPY1 467 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 CXorf49A8MYA2 514 aaPredicted RBP10.4□□□□□ -0.74
CCDC47-206ENST00000584112 PHGDHO43175 533 aaKnown RBP10.4□□□□□ -0.74
CCDC47-206ENST00000584112 CLEC3AO75596 197 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 STK16O75716 305 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 PIAS1O75925 651 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 WISP3O95389 354 aaPredicted RBP10.4□□□□□ -0.74
CCDC47-206ENST00000584112 B3GALT4O96024 378 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 S100BP04271 92 aaPredicted RBP10.4□□□□□ -0.74
CCDC47-206ENST00000584112 CD1DP15813 335 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 EEF1DP29692 281 aaKnown RBP10.4□□□□□ -0.74
CCDC47-206ENST00000584112 STX2P32856 288 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 GDF5P43026 501 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 PLTPP55058 493 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 RAB10P61026 200 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 ETF1P62495 437 aaKnown RBP10.4□□□□□ -0.74
CCDC47-206ENST00000584112 OC90Q02509 493 aaPredicted RBP10.4□□□□□ -0.74
CCDC47-206ENST00000584112 RBPJQ06330 500 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 NAB1Q13506 487 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 LAPTM5Q13571 262 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 OR1C1Q15619 314 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 GRTP1Q5TC63 336 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 CHSY3Q70JA7 882 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 CTAGE3PQ8IX95 158 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 CYP4X1Q8N118 509 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 CA13Q8N1Q1 262 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 FAM98AQ8NCA5 519 aaKnown RBP10.4□□□□□ -0.74
CCDC47-206ENST00000584112 MDS2Q8NDY4 140 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 CCT6BQ92526 530 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 RHBGQ9H310 441 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 NPDC1Q9NQX5 325 aaPredicted RBP10.4□□□□□ -0.74
CCDC47-206ENST00000584112 CD274Q9NZQ7 290 aa10.4□□□□□ -0.74
CCDC47-206ENST00000584112 MRPS33Q9Y291 106 aaKnown RBP10.4□□□□□ -0.74
CCDC47-206ENST00000584112 KMT2CQ8NEZ4 4911 aaKnown RBP10.4□□□□□ -0.75
CCDC47-206ENST00000584112 FREM3P0C091 2139 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 IGKV3D-11A0A0A0MRZ8 115 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 CTAGE15A4D2H0 777 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 LRIT2A6NDA9 550 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 C4orf51C9J302 202 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 H7C1Q1 480 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 CLDN4O14493 209 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 TAPBPO15533 448 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 ERI3O43414 337 aaKnown RBP10.39□□□□□ -0.75
CCDC47-206ENST00000584112 B3GALT2O43825 422 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 DNAJB6O75190 326 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 MAOAP21397 527 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 CD96P40200 585 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 HSPA7P48741 367 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 BTN3A2P78410 334 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 BTG2P78543 158 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 TGM3Q08188 693 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 RCN2Q14257 317 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 TERF2Q15554 542 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms