RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 CRYZQ08257 329 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 RNF187Q5TA31 235 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 ADGRD1Q6QNK2 874 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 HSDL2Q6YN16 418 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 PPP1R21Q6ZMI0 780 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 C17orf64Q86WR6 236 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 ABHD11Q8NFV4 315 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 MBD3L2Q8NHZ7 208 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 NT5CQ8TCD5 201 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 IGFBPL1Q8WX77 278 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 PRDM14Q9GZV8 571 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 LACRTQ9GZZ8 138 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 EPB41L4BQ9H329 900 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 ZFP64Q9NPA5 681 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 CHRAC1Q9NRG0 131 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 PNO1Q9NRX1 252 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 GALNT8Q9NY28 637 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 KLHL42Q9P2K6 505 aa12.74□□□□□ -0.37
CSNK1D-219ENST00000581660 LRRC3CA6NJW4 275 aa12.73□□□□□ -0.37
CSNK1D-219ENST00000581660 DEFB108AA8MXU0 73 aa12.73□□□□□ -0.37
CSNK1D-219ENST00000581660 CASKO14936 926 aa12.73□□□□□ -0.37
CSNK1D-219ENST00000581660 SIAH2O43255 324 aa12.73□□□□□ -0.37
CSNK1D-219ENST00000581660 ZNF354AO60765 605 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-219ENST00000581660 ARNTP27540 789 aa12.73□□□□□ -0.37
CSNK1D-219ENST00000581660 PPP2R1BP30154 601 aa12.73□□□□□ -0.37
CSNK1D-219ENST00000581660 SF3B4Q15427 424 aaKnown RBP eCLIP12.73□□□□□ -0.372e-13■■■■■ 39.2
CSNK1D-219ENST00000581660 SPA17Q15506 151 aa12.73□□□□□ -0.37
CSNK1D-219ENST00000581660 OPN5Q6U736 354 aa12.73□□□□□ -0.37
CSNK1D-219ENST00000581660 PM20D2Q8IYS1 436 aa12.73□□□□□ -0.37
CSNK1D-219ENST00000581660 CA13Q8N1Q1 262 aa12.73□□□□□ -0.37
CSNK1D-219ENST00000581660 OR4K1Q8NGD4 311 aa12.73□□□□□ -0.37
CSNK1D-219ENST00000581660 OR8K3Q8NH51 312 aa12.73□□□□□ -0.37
CSNK1D-219ENST00000581660 UTP15Q8TED0 518 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-219ENST00000581660 TCF12Q99081 682 aa12.73□□□□□ -0.37
CSNK1D-219ENST00000581660 RBM24Q9BX46 236 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-219ENST00000581660 ADAP2Q9NPF8 381 aa12.73□□□□□ -0.37
CSNK1D-219ENST00000581660 BOKQ9UMX3 212 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-219ENST00000581660 PACSIN2Q9UNF0 486 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-219ENST00000581660 SYNDIG1LA6NDD5 238 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 TGFBR3LH3BV60 316 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 HAX1O00165 279 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 TLX2O43763 284 aaPredicted RBP12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 ZBTB14O43829 449 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 MPC1LP0DKB6 136 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 SMIM10L1P0DMW3 83 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 CDH1P12830 882 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 PIGAP37287 484 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 AGFG1P52594 562 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 NAP1L1P55209 391 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 RGS1Q08116 209 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 ELAVL1Q15717 326 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 TTLL9Q3SXZ7 439 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 PCID2Q5JVF3 399 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 MRNIPQ6NTE8 343 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 LCTLQ6UWM7 567 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 RAD9BQ6WBX8 426 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 LIX1Q8N485 282 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 MEIOBQ8N635 442 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 PRELID2Q8N945 189 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 GIMAP7Q8NHV1 300 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 SLC35B2Q8TB61 432 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 SMIM10Q96HG1 83 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 SLC30A3Q99726 388 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 TIMP4Q99727 224 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 SGPP1Q9BX95 441 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 UBTD1Q9HAC8 227 aa12.72□□□□□ -0.37
CSNK1D-219ENST00000581660 FREM3P0C091 2139 aa12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 C15orf38-AP3S2A0A0A6YYH1 394 aa12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 TCRBV7S2A1N4TA0A589 114 aa12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 TRBC2A0A5B9 178 aa12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 GRID2IPA4D2P6 1211 aa12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 CTIFO43310 598 aaKnown RBP12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 ERN1O75460 977 aaKnown RBP12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 ENO3P13929 434 aaPredicted RBP12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 NID1P14543 1247 aa12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 CCND1P24385 295 aa12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 HSD17B7P56937 341 aa12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 TBL3Q12788 808 aaKnown RBP12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 CYHR1Q6ZMK1 362 aa12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 SDCCAG8Q86SQ7 713 aaPredicted RBP12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 CCDC170Q8IYT3 715 aa12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 TMEM132CQ8N3T6 1108 aa12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 RASGEF1CQ8N431 466 aa12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 LRRC57Q8N9N7 239 aa12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 PAQR8Q8TEZ7 354 aa12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 RHBGQ9H310 441 aa12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 CALHM2Q9HA72 323 aa12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 ETNK1Q9HBU6 452 aa12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 ZNF701Q9NV72 531 aaPredicted RBP12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 C6orf203Q9P0P8 240 aaPredicted RBP12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 NDRG3Q9UGV2 375 aa12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 ZFP69BQ9UJL9 534 aa12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 EPN1Q9Y6I3 576 aaPredicted RBP12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 MEGF8Q7Z7M0 2845 aa12.71□□□□□ -0.37
CSNK1D-219ENST00000581660 E5RI56 91 aa12.7□□□□□ -0.38
CSNK1D-219ENST00000581660 PFDN6O15212 129 aa12.7□□□□□ -0.38
CSNK1D-219ENST00000581660 OR1F1O43749 312 aa12.7□□□□□ -0.38
CSNK1D-219ENST00000581660 NPPBP16860 134 aa12.7□□□□□ -0.38
CSNK1D-219ENST00000581660 AHRP35869 848 aa12.7□□□□□ -0.38
CSNK1D-219ENST00000581660 FDFT1P37268 417 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms