RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 ARMC10Q8N2F6 343 aa19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 ADAMTS18Q8TE60 1221 aa19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 TRIM45Q9H8W5 580 aaPredicted RBP19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 OPTCQ9UBM4 332 aa19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 SH3BGRL2Q9UJC5 107 aa19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 ZNF223Q9UK11 482 aaPredicted RBP19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 FBXW2Q9UKT8 454 aa19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 MRPS33Q9Y291 106 aaKnown RBP19.87■□□□□ 0.77
CSNK1D-215ENST00000580784 MYOCOSA0A1B0GUC4 107 aa19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 NPIPA5E9PKD4 350 aa19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 K7EPI3 171 aa19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 CDK2AP1O14519 115 aa19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 NME2P1O60361 137 aa19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 SH3BGRLO75368 114 aa19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 C2P06681 752 aa19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 MTHFD2P13995 350 aa19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 NME2P22392 152 aa19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 TRHRP34981 398 aaPredicted RBP19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 CA7P43166 264 aa19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 GPR143P51810 404 aa19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 RBPJQ06330 500 aa19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 TGM3Q08188 693 aa19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 TERF2Q15554 542 aa19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 ZNF473Q8WTR7 871 aaKnown RBP19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 GPR137Q96N19 417 aa19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 MS4A8Q9BY19 250 aa19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 PRM3Q9NNZ6 103 aa19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 KCMF1Q9P0J7 381 aa19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 NPIPA1Q9UND3 350 aa19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 PPIEQ9UNP9 301 aaKnown RBP19.86■□□□□ 0.77
CSNK1D-215ENST00000580784 RTCAO00442 366 aaKnown RBP19.85■□□□□ 0.77
CSNK1D-215ENST00000580784 FCHO1O14526 889 aa19.85■□□□□ 0.77
CSNK1D-215ENST00000580784 SLC19A2O60779 497 aa19.85■□□□□ 0.77
CSNK1D-215ENST00000580784 CTNSO60931 367 aa19.85■□□□□ 0.77
CSNK1D-215ENST00000580784 URI1O94763 535 aaPredicted RBP19.85■□□□□ 0.77
CSNK1D-215ENST00000580784 TGFB1P01137 390 aa19.85■□□□□ 0.77
CSNK1D-215ENST00000580784 PCNAP12004 261 aa19.85■□□□□ 0.77
CSNK1D-215ENST00000580784 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.85■□□□□ 0.77
CSNK1D-215ENST00000580784 KRTCAP3Q53RY4 240 aa19.85■□□□□ 0.77
CSNK1D-215ENST00000580784 UBAP2Q5T6F2 1119 aaKnown RBP19.85■□□□□ 0.77
CSNK1D-215ENST00000580784 MED27Q6P2C8 311 aa19.85■□□□□ 0.77
CSNK1D-215ENST00000580784 ZNF793Q6ZN11 406 aa19.85■□□□□ 0.77
CSNK1D-215ENST00000580784 LAS2Q8IYD9 372 aa19.85■□□□□ 0.77
CSNK1D-215ENST00000580784 FAM98AQ8NCA5 519 aaKnown RBP19.85■□□□□ 0.77
CSNK1D-215ENST00000580784 OR7G3Q8NG95 312 aa19.85■□□□□ 0.77
CSNK1D-215ENST00000580784 UBTD2Q8WUN7 234 aa19.85■□□□□ 0.77
CSNK1D-215ENST00000580784 NCLNQ969V3 563 aa19.85■□□□□ 0.77
CSNK1D-215ENST00000580784 VMP1Q96GC9 406 aa19.85■□□□□ 0.77
CSNK1D-215ENST00000580784 KCNC2Q96PR1 638 aa19.85■□□□□ 0.77
CSNK1D-215ENST00000580784 MAPKAP1Q9BPZ7 522 aa19.85■□□□□ 0.77
CSNK1D-215ENST00000580784 A0A087X1B8 175 aa19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 PRKNO60260 465 aaPredicted RBP19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 ITGA10O75578 1167 aa19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 IFNA16P05015 189 aa19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 ATP5A1P25705 553 aaKnown RBP19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 PCDH1Q08174 1060 aa19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 UAP1Q16222 522 aaPredicted RBP19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 RNFT1Q5M7Z0 435 aa19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 SIAH3Q8IW03 269 aa19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 RNF175Q8N4F7 328 aa19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 CPSF7Q8N684 471 aaKnown RBP19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 TEX9Q8N6V9 391 aa19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 ACOT4Q8N9L9 421 aa19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 SRFBP1Q8NEF9 429 aaKnown RBP19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 RHEBL1Q8TAI7 183 aa19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 UBE2E3Q969T4 207 aa19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 TMEM125Q96AQ2 219 aa19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 CCDC120Q96HB5 630 aa19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 C16orf45Q96MC5 204 aaPredicted RBP19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 TBCDQ9BTW9 1192 aa19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 ALOXE3Q9BYJ1 711 aa19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 ROGDIQ9GZN7 287 aa19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 ADAP2Q9NPF8 381 aa19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 SNX15Q9NRS6 342 aa19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 NINJ2Q9NZG7 142 aa19.84■□□□□ 0.77
CSNK1D-215ENST00000580784 SAP18O00422 153 aaKnown RBP19.83■□□□□ 0.77
CSNK1D-215ENST00000580784 ZNHIT1O43257 154 aa19.83■□□□□ 0.77
CSNK1D-215ENST00000580784 ASNA1O43681 348 aa19.83■□□□□ 0.77
CSNK1D-215ENST00000580784 MLYCDO95822 493 aa19.83■□□□□ 0.77
CSNK1D-215ENST00000580784 EPB42P16452 691 aa19.83■□□□□ 0.77
CSNK1D-215ENST00000580784 STX4Q12846 297 aa19.83■□□□□ 0.77
CSNK1D-215ENST00000580784 RCN2Q14257 317 aa19.83■□□□□ 0.77
CSNK1D-215ENST00000580784 C3AR1Q16581 482 aa19.83■□□□□ 0.77
CSNK1D-215ENST00000580784 FAM83EQ2M2I3 478 aa19.83■□□□□ 0.77
CSNK1D-215ENST00000580784 TMEM35AQ53FP2 167 aa19.83■□□□□ 0.77
CSNK1D-215ENST00000580784 SP5Q6BEB4 398 aaPredicted RBP19.83■□□□□ 0.77
CSNK1D-215ENST00000580784 C16orf47Q6ZP98 133 aaPredicted RBP19.83■□□□□ 0.77
CSNK1D-215ENST00000580784 CHSY3Q70JA7 882 aa19.83■□□□□ 0.77
CSNK1D-215ENST00000580784 TMEM132CQ8N3T6 1108 aa19.83■□□□□ 0.77
CSNK1D-215ENST00000580784 ITLN2Q8WWU7 325 aaPredicted RBP19.83■□□□□ 0.77
CSNK1D-215ENST00000580784 LIN28AQ9H9Z2 209 aaKnown RBP19.83■□□□□ 0.77
CSNK1D-215ENST00000580784 LYRM4Q9HD34 91 aa19.83■□□□□ 0.77
CSNK1D-215ENST00000580784 SUCOQ9UBS9 1254 aaKnown RBP19.83■□□□□ 0.77
CSNK1D-215ENST00000580784 VTI1BQ9UEU0 232 aa19.83■□□□□ 0.77
CSNK1D-215ENST00000580784 ZNF835Q9Y2P0 537 aa19.83■□□□□ 0.77
CSNK1D-215ENST00000580784 CLCA3PQ9Y6N3 262 aa19.83■□□□□ 0.77
CSNK1D-215ENST00000580784 A0A096LPK6 155 aa19.82■□□□□ 0.76
CSNK1D-215ENST00000580784 LRRC14BA6NHZ5 514 aa19.82■□□□□ 0.76
CSNK1D-215ENST00000580784 SYCE1LA8MT33 242 aa19.82■□□□□ 0.76
CSNK1D-215ENST00000580784 LDB3O75112 727 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms