RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 AHSPQ9NZD4 102 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 TMEM216Q9P0N5 145 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 COPG2Q9UBF2 871 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.16□□□□□ -1.42
TRAF4-213ENST00000578917 FBXW2Q9UKT8 454 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 GRID1Q9ULK0 1009 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 CLCA3PQ9Y6N3 262 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 V9GYY5 206 aaPredicted RBP6.16□□□□□ -1.42
TRAF4-213ENST00000578917 CNTRLQ7Z7A1 2325 aa6.16□□□□□ -1.42
TRAF4-213ENST00000578917 MYOCOSA0A1B0GUC4 107 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 A0A1W2PPM1 405 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 H0YIV9 168 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 FOXE1O00358 373 aaPredicted RBP6.15□□□□□ -1.42
TRAF4-213ENST00000578917 CTNSO60931 367 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 CDH16O75309 829 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 MLYCDO95822 493 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 WDPCPO95876 746 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 KRT6AP02538 564 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 KRT6BP04259 564 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 CELA2AP08217 269 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 COX7A2P14406 83 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 KRT4P19013 534 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 IMPDH1P20839 514 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 ATP5F1P24539 256 aaPredicted RBP6.15□□□□□ -1.42
TRAF4-213ENST00000578917 GCAP28676 217 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 TNFRSF8P28908 595 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 HSD17B3P37058 310 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 BUD31P41223 144 aaPredicted RBP6.15□□□□□ -1.42
TRAF4-213ENST00000578917 KRT6CP48668 564 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 CD97P48960 835 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 RAB38P57729 211 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 RPS13P62277 151 aaKnown RBP6.15□□□□□ -1.42
TRAF4-213ENST00000578917 VSNL1P62760 191 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 HERVK_113P63132 956 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 FOXK1P85037 733 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 PCDH1Q08174 1060 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 ZNF169Q14929 603 aaPredicted RBP6.15□□□□□ -1.42
TRAF4-213ENST00000578917 MEP1AQ16819 746 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 ADPRMQ3LIE5 342 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 FRG2Q64ET8 278 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 B3GNTL1Q67FW5 361 aaPredicted RBP6.15□□□□□ -1.42
TRAF4-213ENST00000578917 QSOX2Q6ZRP7 698 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 PAGE2Q7Z2X7 111 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 VN1R5Q7Z5H4 357 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 GPR180Q86V85 440 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 SLC22A9Q8IVM8 553 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 TMEM132CQ8N3T6 1108 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 RNF175Q8N4F7 328 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 HORMAD2Q8N7B1 307 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 L3MBTL4Q8NA19 623 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 CATSPER1Q8NEC5 780 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 C7orf57Q8NEG2 295 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 OR52B6Q8NGF0 335 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 METTL6Q8TCB7 284 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 EPS8L3Q8TE67 593 aaKnown RBP6.15□□□□□ -1.42
TRAF4-213ENST00000578917 THAP3Q8WTV1 239 aaPredicted RBP6.15□□□□□ -1.42
TRAF4-213ENST00000578917 HAS2Q92819 552 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 CCDC126Q96EE4 140 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 NSUN5Q96P11 429 aaKnown RBP6.15□□□□□ -1.42
TRAF4-213ENST00000578917 QRFPRQ96P65 431 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 FRG2BQ96QU4 278 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 SERPINI1Q99574 410 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 MAPKAP1Q9BPZ7 522 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 UTP23Q9BRU9 249 aaKnown RBP6.15□□□□□ -1.42
TRAF4-213ENST00000578917 SORBS1Q9BX66 1292 aaKnown RBP6.15□□□□□ -1.42
TRAF4-213ENST00000578917 ERVK-6Q9BXR3 956 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 MS4A8Q9BY19 250 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 ALOXE3Q9BYJ1 711 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 TXLNGYQ9BZA5 131 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 CDCP1Q9H5V8 836 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 ANKZF1Q9H8Y5 726 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 LYRM4Q9HD34 91 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 DMRT3Q9NQL9 472 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 NECTIN3Q9NQS3 549 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 PRDM7Q9NQW5 492 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 PHF11Q9UIL8 331 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 PCTPQ9UKL6 214 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 DAPP1Q9UN19 280 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 SNX6Q9UNH7 406 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 SLC12A4Q9UP95 1085 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 STK38LQ9Y2H1 464 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 MMACHCQ9Y4U1 282 aa6.15□□□□□ -1.42
TRAF4-213ENST00000578917 TRAV17A0A0B4J275 112 aa6.14□□□□□ -1.43
TRAF4-213ENST00000578917 A0A1W2PQ72 361 aa6.14□□□□□ -1.43
TRAF4-213ENST00000578917 TCRBV16S1A1N1A0A5B0 115 aa6.14□□□□□ -1.43
TRAF4-213ENST00000578917 BLACEA4D250 179 aa6.14□□□□□ -1.43
TRAF4-213ENST00000578917 SYNDIG1LA6NDD5 238 aa6.14□□□□□ -1.43
TRAF4-213ENST00000578917 A8MT66 165 aa6.14□□□□□ -1.43
TRAF4-213ENST00000578917 FOXO6A8MYZ6 492 aa6.14□□□□□ -1.43
TRAF4-213ENST00000578917 C4orf51C9J302 202 aa6.14□□□□□ -1.43
TRAF4-213ENST00000578917 CYR61O00622 381 aa6.14□□□□□ -1.43
TRAF4-213ENST00000578917 OR7A17O14581 309 aa6.14□□□□□ -1.43
TRAF4-213ENST00000578917 OR10H2O60403 315 aa6.14□□□□□ -1.43
TRAF4-213ENST00000578917 DLX3O60479 287 aa6.14□□□□□ -1.43
TRAF4-213ENST00000578917 GLRA3O75311 464 aa6.14□□□□□ -1.43
TRAF4-213ENST00000578917 GUCY1B2O75343 617 aa6.14□□□□□ -1.43
TRAF4-213ENST00000578917 ULK1O75385 1050 aa6.14□□□□□ -1.43
TRAF4-213ENST00000578917 ZIC2O95409 532 aaPredicted RBP6.14□□□□□ -1.43
TRAF4-213ENST00000578917 GBAP04062 536 aa6.14□□□□□ -1.43
TRAF4-213ENST00000578917 FAM58BPP0C7Q3 252 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms