RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 PTBP2Q9UKA9 531 aaKnown RBP13.93□□□□□ -0.18
RN7SL560P-201ENST00000577943 ZNF490Q9ULM2 529 aaPredicted RBP13.93□□□□□ -0.18
RN7SL560P-201ENST00000577943 DAPP1Q9UN19 280 aa13.93□□□□□ -0.18
RN7SL560P-201ENST00000577943 MEMO1Q9Y316 297 aa13.93□□□□□ -0.18
RN7SL560P-201ENST00000577943 UTP11Q9Y3A2 253 aaKnown RBP13.93□□□□□ -0.18
RN7SL560P-201ENST00000577943 PHF3Q92576 2039 aaKnown RBP13.93□□□□□ -0.18
RN7SL560P-201ENST00000577943 PRRG2O14669 202 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 TFECO14948 347 aaPredicted RBP13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 ZNHIT1O43257 154 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 TBX6O95947 436 aaPredicted RBP13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 IFNA16P05015 189 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 SNRPB2P08579 225 aaKnown RBP13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 CD22P20273 847 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 AGAP20933 346 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 SSR4P51571 173 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 PLTPP55058 493 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 LIM2P55344 173 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 GPX6P59796 221 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 IRF8Q02556 426 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 CHIT1Q13231 466 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 SLMAPQ14BN4 828 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 ZKSCAN8Q15776 578 aaPredicted RBP13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 PAGE2BQ5JRK9 111 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 RNFT1Q5M7Z0 435 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 GRTP1Q5TC63 336 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 ADNP2Q6IQ32 1131 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 RAPH1Q70E73 1250 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 CCDC25Q86WR0 208 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 SULF2Q8IWU5 870 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 PPM1NQ8N819 430 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 SRFBP1Q8NEF9 429 aaKnown RBP13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 AGAP11Q8TF27 550 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 UBXN10Q96LJ8 280 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 F2RL3Q96RI0 385 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 CSF3RQ99062 836 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 GRHL1Q9NZI5 618 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 ZNF223Q9UK11 482 aaPredicted RBP13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 PPIEQ9UNP9 301 aaKnown RBP13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 YARS2Q9Y2Z4 477 aaKnown RBP13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 CLDN16Q9Y5I7 305 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 CLCA3PQ9Y6N3 262 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 NINQ8N4C6 2090 aa13.92□□□□□ -0.18
RN7SL560P-201ENST00000577943 MYOCOSA0A1B0GUC4 107 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 SYNDIG1LA6NDD5 238 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 CYR61O00622 381 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 PEX1O43933 1283 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 FAM155BO75949 473 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 ZFAND5O76080 213 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 COX6B1P14854 86 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 TFEBP19484 476 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 PTGER1P34995 402 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 GMPRP36959 345 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 RFC3P40938 356 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 MSH2P43246 934 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 KCNC1P48547 511 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 GPR143P51810 404 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 STX4Q12846 297 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 BMPR2Q13873 1038 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 EFTUD2Q15029 972 aaKnown RBP eCLIP13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 KBTBD12Q3ZCT8 623 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 LRRC70Q7Z2Q7 622 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 EID3Q8N140 333 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 TMEM132CQ8N3T6 1108 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 STAG3L4Q8TBR4 150 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 WDR34Q96EX3 536 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 KCNC2Q96PR1 638 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 PHF12Q96QT6 1004 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 ALOXE3Q9BYJ1 711 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 CD244Q9BZW8 370 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 ROGDIQ9GZN7 287 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 ALG9Q9H6U8 611 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 LIN28AQ9H9Z2 209 aaKnown RBP13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 PRDM7Q9NQW5 492 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 ERVK-11Q9UQG0 969 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 FREM3P0C091 2139 aa13.91□□□□□ -0.18
RN7SL560P-201ENST00000577943 INTS1Q8N201 2190 aaKnown RBP13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 LRBAP50851 2863 aa13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 A8MVJ9 347 aa13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 SUPT3HB4E1H0 165 aa13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 PRKNO60260 465 aaPredicted RBP13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 CDC40O60508 579 aaKnown RBP eCLIP13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 CTNSO60931 367 aa13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 SUPT3HO75486 399 aa13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 CLDN14O95500 239 aa13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 PCNAP12004 261 aa13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 CASQ1P31415 396 aa13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 STX2P32856 288 aa13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 GPR85P60893 370 aa13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 CAV1Q03135 178 aa13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 ELAVL1Q15717 326 aaKnown RBP13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 TBCCQ15814 346 aa13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 C3P1Q6ZMU1 363 aa13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 NCCRP1Q6ZVX7 275 aaPredicted RBP13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 GDF7Q7Z4P5 450 aa13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 MDGA2Q7Z553 956 aa13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 CMC1Q7Z7K0 106 aa13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 TBC1D1Q86TI0 1168 aaPredicted RBP13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 ISCA2Q86U28 154 aa13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 DOLPP1Q86YN1 238 aa13.9□□□□□ -0.18
RN7SL560P-201ENST00000577943 FBXO25Q8TCJ0 367 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms