RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 C13orf42A0A1B0GVH6 325 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 IGHV3-13P01766 116 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 ACADSP16219 412 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 CRYBA2P53672 197 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 ADARP55265 1226 aaKnown RBP4.01□□□□□ -1.77
CDC27-219ENST00000576484 RCN2Q14257 317 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 ZNF674Q2M3X9 581 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 RFTN2Q52LD8 501 aaPredicted RBP4.01□□□□□ -1.77
CDC27-219ENST00000576484 TCTEX1D4Q5JR98 221 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 GLRA4Q5JXX5 417 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 TEX35Q5T0J7 233 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 LYPLAL1Q5VWZ2 237 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 NEPROQ6NW34 567 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 KCTD9Q7L273 389 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 MCM10Q7L590 875 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 RNF130Q86XS8 419 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 OR4N5Q8IXE1 308 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 CCDC170Q8IYT3 715 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 PDLIM5Q96HC4 596 aaKnown RBP4.01□□□□□ -1.77
CDC27-219ENST00000576484 EPSTI1Q96J88 318 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 ATF6BQ99941 703 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 CHCHD5Q9BSY4 110 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 CCDC28BQ9BUN5 200 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 LRRC2Q9BYS8 371 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 TRIM6Q9C030 488 aaPredicted RBP4.01□□□□□ -1.77
CDC27-219ENST00000576484 MMADHCQ9H3L0 296 aaPredicted RBP4.01□□□□□ -1.77
CDC27-219ENST00000576484 S100A14Q9HCY8 104 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 MIS18AQ9NYP9 233 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 ZNF319Q9P2F9 582 aa4.01□□□□□ -1.77
CDC27-219ENST00000576484 FAM149AA5PLN7 773 aa4□□□□□ -1.77
CDC27-219ENST00000576484 K7EQG2 157 aa4□□□□□ -1.77
CDC27-219ENST00000576484 ZNF263O14978 683 aa4□□□□□ -1.77
CDC27-219ENST00000576484 CHUKO15111 745 aa4□□□□□ -1.77
CDC27-219ENST00000576484 UROSP10746 265 aa4□□□□□ -1.77
CDC27-219ENST00000576484 SKILP12757 684 aa4□□□□□ -1.77
CDC27-219ENST00000576484 GATA2P23769 480 aaPredicted RBP4□□□□□ -1.77
CDC27-219ENST00000576484 DSCR10P59022 87 aa4□□□□□ -1.77
CDC27-219ENST00000576484 SLC34A1Q06495 639 aa4□□□□□ -1.77
CDC27-219ENST00000576484 COX10Q12887 443 aa4□□□□□ -1.77
CDC27-219ENST00000576484 SIX1Q15475 284 aaPredicted RBP4□□□□□ -1.77
CDC27-219ENST00000576484 PRAMEF8Q5VWM4 474 aa4□□□□□ -1.77
CDC27-219ENST00000576484 CACUL1Q86Y37 369 aa4□□□□□ -1.77
CDC27-219ENST00000576484 ZNF444Q8N0Y2 327 aaPredicted RBP4□□□□□ -1.77
CDC27-219ENST00000576484 C8orf46Q8TAG6 207 aa4□□□□□ -1.77
CDC27-219ENST00000576484 SPATA18Q8TC71 538 aa4□□□□□ -1.77
CDC27-219ENST00000576484 GGHQ92820 318 aa4□□□□□ -1.77
CDC27-219ENST00000576484 PTP4A1Q93096 173 aa4□□□□□ -1.77
CDC27-219ENST00000576484 NABP1Q96AH0 204 aa4□□□□□ -1.77
CDC27-219ENST00000576484 ZNF274Q96GC6 653 aaPredicted RBP4□□□□□ -1.77
CDC27-219ENST00000576484 OCR1Q9BZK8 76 aa4□□□□□ -1.77
CDC27-219ENST00000576484 VIPAS39Q9H9C1 493 aa4□□□□□ -1.77
CDC27-219ENST00000576484 PLEKHA3Q9HB20 300 aa4□□□□□ -1.77
CDC27-219ENST00000576484 PNPLA3Q9NST1 481 aa4□□□□□ -1.77
CDC27-219ENST00000576484 PSORS1C1Q9UIG5 152 aa4□□□□□ -1.77
CDC27-219ENST00000576484 ITM2BQ9Y287 266 aa4□□□□□ -1.77
CDC27-219ENST00000576484 SMIM30A4D0T7 59 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 ACOD1A6NK06 481 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 SHISA9B4DS77 424 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 SYT7O43581 403 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 SBK2P0C263 348 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 STX1BP61266 288 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 SRPXP78539 464 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 RBBP4Q09028 425 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 FCHO2Q0JRZ9 810 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 SLC1A5Q15758 541 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 ZNF841Q6ZN19 808 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 LAX1Q8IWV1 398 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 PHC2Q8IXK0 858 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 LMNTD2Q8IXW0 634 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 RASL10AQ92737 203 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 FAM46BQ96A09 425 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 TAAR6Q96RI8 345 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 ERGIC2Q96RQ1 377 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 PYGO2Q9BRQ0 406 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 RAB11FIP5Q9BXF6 653 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 HEXA-AS1Q9H8Q6 139 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 WDR41Q9HAD4 459 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 IL1RAPL2Q9NP60 686 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 UBE2TQ9NPD8 197 aaPredicted RBP3.99□□□□□ -1.77
CDC27-219ENST00000576484 MED17Q9NVC6 651 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 GTSE1Q9NYZ3 720 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 NOL7Q9UMY1 257 aaKnown RBP3.99□□□□□ -1.77
CDC27-219ENST00000576484 CSAG2Q9Y5P2 127 aa3.99□□□□□ -1.77
CDC27-219ENST00000576484 NOTCH3Q9UM47 2321 aa3.98□□□□□ -1.77
CDC27-219ENST00000576484 TDRD15B5MCY1 1934 aaKnown RBP3.98□□□□□ -1.77
CDC27-219ENST00000576484 TRGV8A0A0C4DH27 118 aa3.98□□□□□ -1.77
CDC27-219ENST00000576484 TRBV5-4A0A0C4DH59 114 aa3.98□□□□□ -1.77
CDC27-219ENST00000576484 ATP6AP2A0A1C7CYW4 349 aa3.98□□□□□ -1.77
CDC27-219ENST00000576484 FAM170AA1A519 330 aa3.98□□□□□ -1.77
CDC27-219ENST00000576484 FMO6PO60774 539 aa3.98□□□□□ -1.77
CDC27-219ENST00000576484 LYNP07948 512 aa3.98□□□□□ -1.77
CDC27-219ENST00000576484 HOXD4P09016 255 aaPredicted RBP3.98□□□□□ -1.77
CDC27-219ENST00000576484 EZRP15311 586 aaKnown RBP3.98□□□□□ -1.77
CDC27-219ENST00000576484 VCLP18206 1134 aa3.98□□□□□ -1.77
CDC27-219ENST00000576484 PEX3P56589 373 aa3.98□□□□□ -1.77
CDC27-219ENST00000576484 SLC8A3P57103 927 aa3.98□□□□□ -1.77
CDC27-219ENST00000576484 KRT71Q3SY84 523 aa3.98□□□□□ -1.77
CDC27-219ENST00000576484 KCTD11Q693B1 232 aa3.98□□□□□ -1.77
CDC27-219ENST00000576484 TMEM270Q6UE05 265 aa3.98□□□□□ -1.77
CDC27-219ENST00000576484 TIPARPQ7Z3E1 657 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms