RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 KLHL31Q9H511 634 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 PLEKHF2Q9H8W4 249 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 SEMA4BQ9NPR2 832 aaPredicted RBP11.28□□□□□ -0.6
PRPF8-208ENST00000573716 EIF2B3Q9NR50 452 aaKnown RBP11.28□□□□□ -0.6
PRPF8-208ENST00000573716 PRTFDC1Q9NRG1 225 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 BEX4Q9NWD9 120 aaPredicted RBP11.28□□□□□ -0.6
PRPF8-208ENST00000573716 KLHL42Q9P2K6 505 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 MYOTQ9UBF9 498 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 MED16Q9Y2X0 877 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 MMACHCQ9Y4U1 282 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 EPN1Q9Y6I3 576 aaPredicted RBP11.28□□□□□ -0.6
PRPF8-208ENST00000573716 NCKAP5O14513 1909 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 A0A0G2JN53 185 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 URADA6NGE7 173 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 CLCA1A8K7I4 914 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 INAFM1C9JVW0 142 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 NRDCO43847 1150 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 CCL3P10147 92 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 CD53P19397 219 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 PIGAP37287 484 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 TRPC1P48995 793 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 GPR143P51810 404 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 BTN3A2P78410 334 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 CSHL1Q14406 222 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 RBBP5Q15291 538 aaKnown RBP11.27□□□□□ -0.61
PRPF8-208ENST00000573716 GSTA5Q7RTV2 222 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 KIF18BQ86Y91 864 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 ULK2Q8IYT8 1036 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 SYCE1Q8N0S2 351 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 LIX1Q8N485 282 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 NAXEQ8NCW5 288 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 ABHD11Q8NFV4 315 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 TNIP2Q8NFZ5 429 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 EEF1AKMT1Q8WVE0 214 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 ZNF669Q96BR6 464 aaPredicted RBP11.27□□□□□ -0.61
PRPF8-208ENST00000573716 SNF8Q96H20 258 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 AARSD1Q9BTE6 412 aaKnown RBP11.27□□□□□ -0.61
PRPF8-208ENST00000573716 FRMD8P1Q9BZ68 369 aaPredicted RBP11.27□□□□□ -0.61
PRPF8-208ENST00000573716 TSGA10Q9BZW7 698 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 SLC6A15Q9H2J7 730 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 SPNS1Q9H2V7 528 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 PARVBQ9HBI1 364 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 ADAP2Q9NPF8 381 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 TRMT6Q9UJA5 497 aaKnown RBP11.27□□□□□ -0.61
PRPF8-208ENST00000573716 ZFP69BQ9UJL9 534 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 CLCA3PQ9Y6N3 262 aa11.27□□□□□ -0.61
PRPF8-208ENST00000573716 STAB1Q9NY15 2570 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 HIVEP2P31629 2446 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 CTAGE15A4D2H0 777 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 BTNL10A8MVZ5 291 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 EEF1E1-BLOC1S5C9J1V9 151 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 C4orf51C9J302 202 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 TGFBR3LH3BV60 316 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 CLDN4O14493 209 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 EEF1E1O43324 174 aaKnown RBP11.26□□□□□ -0.61
PRPF8-208ENST00000573716 HCN1O60741 890 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 C8GP07360 202 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 HIST1H2AGP0C0S8 130 aaPredicted RBP11.26□□□□□ -0.61
PRPF8-208ENST00000573716 HIST1H2ADP20671 130 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 ENDOUP21128 410 aaKnown RBP11.26□□□□□ -0.61
PRPF8-208ENST00000573716 RGS4P49798 205 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 AGFG1P52594 562 aaKnown RBP11.26□□□□□ -0.61
PRPF8-208ENST00000573716 HK2P52789 917 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 CCZ1BP86790 482 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 CCZ1P86791 482 aaPredicted RBP11.26□□□□□ -0.61
PRPF8-208ENST00000573716 FOXO1Q12778 655 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 DHX34Q14147 1143 aaKnown RBP11.26□□□□□ -0.61
PRPF8-208ENST00000573716 SEM1Q6ZVN7 128 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 CTAGE6Q86UF2 777 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 MYO1HQ8N1T3 1032 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 TMEM132CQ8N3T6 1108 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 FBXW8Q8N3Y1 598 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 FAM47BQ8NA70 645 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 RNF214Q8ND24 703 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 OR4K1Q8NGD4 311 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 FAR2Q96K12 515 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 COX4I2Q96KJ9 171 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 HIST1H2AHQ96KK5 128 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 JSRP1Q96MG2 331 aaPredicted RBP11.26□□□□□ -0.61
PRPF8-208ENST00000573716 HIST1H2AJQ99878 128 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 H2AFJQ9BTM1 129 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 OR8D2Q9GZM6 311 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 EPB41L4BQ9H329 900 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 CLK4Q9HAZ1 481 aaKnown RBP11.26□□□□□ -0.61
PRPF8-208ENST00000573716 HOMER3Q9NSC5 361 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 ARL15Q9NXU5 204 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 FOXD3Q9UJU5 478 aaPredicted RBP11.26□□□□□ -0.61
PRPF8-208ENST00000573716 REXO2Q9Y3B8 237 aaKnown RBP11.26□□□□□ -0.61
PRPF8-208ENST00000573716 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.26□□□□□ -0.61
PRPF8-208ENST00000573716 ATRQ13535 2644 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 FREM3P0C091 2139 aa11.26□□□□□ -0.61
PRPF8-208ENST00000573716 KIAA1549Q9HCM3 1950 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 C15orf38-AP3S2A0A0A6YYH1 394 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 KDM4EB2RXH2 506 aaPredicted RBP11.25□□□□□ -0.61
PRPF8-208ENST00000573716 SMPD2O60906 423 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 TNNI3P19429 210 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 AHRP35869 848 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 SLC1A2P43004 574 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 SCTRP47872 440 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 HNRNPFP52597 415 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms