RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 DUPD1Q68J44 220 aa11.54□□□□□ -0.56
SNX29-207ENST00000568949 UGT3A1Q6NUS8 523 aa11.54□□□□□ -0.56
SNX29-207ENST00000568949 HSDL2Q6YN16 418 aa11.54□□□□□ -0.56
SNX29-207ENST00000568949 LMNTD2Q8IXW0 634 aa11.54□□□□□ -0.56
SNX29-207ENST00000568949 TMEM132CQ8N3T6 1108 aa11.54□□□□□ -0.56
SNX29-207ENST00000568949 FBXW8Q8N3Y1 598 aa11.54□□□□□ -0.56
SNX29-207ENST00000568949 GPATCH11Q8N954 259 aa11.54□□□□□ -0.56
SNX29-207ENST00000568949 TRPV3Q8NET8 790 aa11.54□□□□□ -0.56
SNX29-207ENST00000568949 SCYL1Q96KG9 808 aa11.54□□□□□ -0.56
SNX29-207ENST00000568949 HIST1H2AHQ96KK5 128 aa11.54□□□□□ -0.56
SNX29-207ENST00000568949 OR4K3Q96R72 315 aa11.54□□□□□ -0.56
SNX29-207ENST00000568949 HIST1H2AJQ99878 128 aa11.54□□□□□ -0.56
SNX29-207ENST00000568949 H2AFJQ9BTM1 129 aa11.54□□□□□ -0.56
SNX29-207ENST00000568949 REPIN1Q9BWE0 567 aaKnown RBP11.54□□□□□ -0.56
SNX29-207ENST00000568949 LIN28AQ9H9Z2 209 aaKnown RBP11.54□□□□□ -0.56
SNX29-207ENST00000568949 ADAP2Q9NPF8 381 aa11.54□□□□□ -0.56
SNX29-207ENST00000568949 PRTFDC1Q9NRG1 225 aa11.54□□□□□ -0.56
SNX29-207ENST00000568949 SACM1LQ9NTJ5 587 aa11.54□□□□□ -0.56
SNX29-207ENST00000568949 MTRF1LQ9UGC7 380 aaKnown RBP11.54□□□□□ -0.56
SNX29-207ENST00000568949 CLDN16Q9Y5I7 305 aa11.54□□□□□ -0.56
SNX29-207ENST00000568949 MAGEB16A2A368 324 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 TUBAL3A6NHL2 446 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 WWP2O00308 870 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 LY6G6DO95868 133 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 P04436 131 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 SERPINA6P08185 405 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 F7P08709 466 aaPredicted RBP11.53□□□□□ -0.56
SNX29-207ENST00000568949 ENDOUP21128 410 aaKnown RBP11.53□□□□□ -0.56
SNX29-207ENST00000568949 TACR1P25103 407 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 PPP2R1BP30154 601 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 ZNF75DP51815 510 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 DCAF7P61962 342 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 NKX6-1P78426 367 aaPredicted RBP11.53□□□□□ -0.56
SNX29-207ENST00000568949 SARNPP82979 210 aaKnown RBP11.53□□□□□ -0.56
SNX29-207ENST00000568949 REEP5Q00765 189 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 DHX9Q08211 1270 aaKnown RBP11.53□□□□□ -0.56
SNX29-207ENST00000568949 CSHL1Q14406 222 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 ELAVL1Q15717 326 aaKnown RBP11.53□□□□□ -0.56
SNX29-207ENST00000568949 PHKG1Q16816 387 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 CASC4Q6P4E1 433 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 OPN5Q6U736 354 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 RAD9BQ6WBX8 426 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 FAM47EQ6ZV65 393 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 SEM1Q6ZVN7 128 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 KIAA1328Q86T90 577 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 KIF18BQ86Y91 864 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 EEF1AKMT1Q8WVE0 214 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 SLC5A11Q8WWX8 675 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 NEIL2Q969S2 332 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 PYCR2Q96C36 320 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 NPLQ9BXD5 320 aaPredicted RBP11.53□□□□□ -0.56
SNX29-207ENST00000568949 RBSNQ9H1K0 784 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 SPNS1Q9H2V7 528 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 KLHL31Q9H511 634 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 EXO5Q9H790 373 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 ZNF395Q9H8N7 513 aaPredicted RBP11.53□□□□□ -0.56
SNX29-207ENST00000568949 TUBA8Q9NY65 449 aaPredicted RBP11.53□□□□□ -0.56
SNX29-207ENST00000568949 SPRR3Q9UBC9 169 aa11.53□□□□□ -0.56
SNX29-207ENST00000568949 ZNF629Q9UEG4 869 aaPredicted RBP11.53□□□□□ -0.56
SNX29-207ENST00000568949 TRMT6Q9UJA5 497 aaKnown RBP11.53□□□□□ -0.56
SNX29-207ENST00000568949 ZCWPW2A0A1B0GU75 182 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 TCRBV7S3A2A0A539 114 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 TGFBR3LH3BV60 316 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 ARHGEF9O43307 516 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 CD53P19397 219 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 BMP5P22003 454 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 CEACAM8P31997 349 aaPredicted RBP11.52□□□□□ -0.57
SNX29-207ENST00000568949 SLC1A2P43004 574 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 DNASE1L1P49184 302 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 HK2P52789 917 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 AP1S2P56377 157 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 KIF5AQ12840 1032 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 SLC13A2Q13183 592 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 BMPR2Q13873 1038 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 PCBP2Q15366 365 aaKnown RBP eCLIP11.52□□□□□ -0.57
SNX29-207ENST00000568949 SIX1Q15475 284 aaPredicted RBP11.52□□□□□ -0.57
SNX29-207ENST00000568949 CXXC5Q7LFL8 322 aaKnown RBP11.52□□□□□ -0.57
SNX29-207ENST00000568949 MAATS1Q7Z4T9 603 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 ZNF595Q8IYB9 648 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 ULK2Q8IYT8 1036 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 MYO1HQ8N1T3 1032 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 ANKRD53Q8N9V6 530 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 MORN4Q8NDC4 146 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 OR5L2Q8NGL0 311 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 OR8K3Q8NH51 312 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 CALML6Q8TD86 181 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 ATL1Q8WXF7 558 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 NANOS1Q8WY41 292 aaKnown RBP11.52□□□□□ -0.57
SNX29-207ENST00000568949 DAZLQ92904 295 aaKnown RBP11.52□□□□□ -0.57
SNX29-207ENST00000568949 ZNF669Q96BR6 464 aaPredicted RBP11.52□□□□□ -0.57
SNX29-207ENST00000568949 AIF1LQ9BQI0 150 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 PELI2Q9HAT8 420 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 ARL15Q9NXU5 204 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 FBXO5Q9UKT4 447 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 ATG4BQ9Y4P1 393 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 CLCA3PQ9Y6N3 262 aa11.52□□□□□ -0.57
SNX29-207ENST00000568949 FREM3P0C091 2139 aa11.51□□□□□ -0.57
SNX29-207ENST00000568949 VPS13CQ709C8 3753 aa11.51□□□□□ -0.57
SNX29-207ENST00000568949 CTAGE15A4D2H0 777 aa11.51□□□□□ -0.57
SNX29-207ENST00000568949 PABPN1LA6NDY0 278 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms