RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 IMMP1LQ96LU5 166 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 SMC6Q96SB8 1091 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 CSF3RQ99062 836 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 SHCBP1LQ9BZQ2 653 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 IQCGQ9H095 443 aaKnown RBP12.23□□□□□ -0.45
CNOT1-213ENST00000568158 ZNF700Q9H0M5 742 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 MKS1Q9NXB0 559 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 TRPS1Q9UHF7 1281 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 FBXW2Q9UKT8 454 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 TIMM22Q9Y584 194 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 CCDC151A5D8V7 595 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 MANBAO00462 879 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 CYR61O00622 381 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 TYROBPO43914 113 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 EEDO75530 441 aaKnown RBP12.22□□□□□ -0.45
CNOT1-213ENST00000568158 SEC24DO94855 1032 aaPredicted RBP12.22□□□□□ -0.45
CNOT1-213ENST00000568158 MLYCDO95822 493 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 GBAP04062 536 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 CHN1P15882 459 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 HIST1H1TP22492 207 aaPredicted RBP12.22□□□□□ -0.45
CNOT1-213ENST00000568158 JAK1P23458 1154 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 OR4D2P58180 307 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 MYBPC3Q14896 1274 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 PCLAFQ15004 111 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 SFT2D3Q587I9 215 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 CFAP157Q5JU67 520 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 KCNA7Q96RP8 456 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 ZNF382Q96SR6 550 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 HBEGFQ99075 208 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 SERPINI1Q99574 410 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 WDR77Q9BQA1 342 aaPredicted RBP12.22□□□□□ -0.45
CNOT1-213ENST00000568158 MECRQ9BV79 373 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 GATA5Q9BWX5 397 aaPredicted RBP12.22□□□□□ -0.45
CNOT1-213ENST00000568158 ZNF717Q9BY31 904 aaPredicted RBP12.22□□□□□ -0.45
CNOT1-213ENST00000568158 ROGDIQ9GZN7 287 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 ELOVL6Q9H5J4 265 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 ZBTB20Q9HC78 741 aaPredicted RBP12.22□□□□□ -0.45
CNOT1-213ENST00000568158 MID1IP1Q9NPA3 183 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 PRDM9Q9NQV7 894 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 PRTFDC1Q9NRG1 225 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 GPR83Q9NYM4 423 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 SNX6Q9UNH7 406 aa12.22□□□□□ -0.45
CNOT1-213ENST00000568158 PCDHGA9Q9Y5G4 932 aaKnown RBP12.22□□□□□ -0.45
CNOT1-213ENST00000568158 A0A1W2PQ72 361 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 WASHC1A8K0Z3 465 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 TGFBR3LH3BV60 316 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 PCDH17O14917 1159 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 CTIFO43310 598 aaKnown RBP12.21□□□□□ -0.45
CNOT1-213ENST00000568158 TRIM13O60858 407 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 CYC1P08574 325 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 PRR35P0CG20 571 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 CPN2P22792 545 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 SERPINB3P29508 390 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 HMOX2P30519 316 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 HTR6P50406 440 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 FOXA1P55317 472 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 PKNOX1P55347 436 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 LCP2Q13094 533 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 TNFAIP8L3Q5GJ75 292 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 LIPMQ5VYY2 423 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 LRIG3Q6UXM1 1119 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 QSOX2Q6ZRP7 698 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 CLNKQ7Z7G1 428 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 KBTBD2Q8IY47 623 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 AGAP11Q8TF27 550 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 PSMF1Q92530 271 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 UCN3Q969E3 161 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 MAGEB10Q96LZ2 347 aaPredicted RBP12.21□□□□□ -0.45
CNOT1-213ENST00000568158 SMAD5Q99717 465 aaKnown RBP12.21□□□□□ -0.45
CNOT1-213ENST00000568158 CENPKQ9BS16 269 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 TUBB6Q9BUF5 446 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 MRPL1Q9BYD6 325 aaKnown RBP12.21□□□□□ -0.45
CNOT1-213ENST00000568158 LHPPQ9H008 270 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 DDX31Q9H8H2 851 aaKnown RBP12.21□□□□□ -0.45
CNOT1-213ENST00000568158 LYRM4Q9HD34 91 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 TNFRSF12AQ9NP84 129 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 C19orf25Q9UFG5 118 aaPredicted RBP12.21□□□□□ -0.45
CNOT1-213ENST00000568158 PPT2Q9UMR5 302 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 SLC12A4Q9UP95 1085 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 ZNF451Q9Y4E5 1061 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 CLDN16Q9Y5I7 305 aa12.21□□□□□ -0.45
CNOT1-213ENST00000568158 IGKV3D-11A0A0A0MRZ8 115 aa12.2□□□□□ -0.46
CNOT1-213ENST00000568158 B8ZZF3 427 aa12.2□□□□□ -0.46
CNOT1-213ENST00000568158 CLDN4O14493 209 aa12.2□□□□□ -0.46
CNOT1-213ENST00000568158 SNPHO15079 494 aa12.2□□□□□ -0.46
CNOT1-213ENST00000568158 TMPRSS11DO60235 418 aa12.2□□□□□ -0.46
CNOT1-213ENST00000568158 CTNSO60931 367 aa12.2□□□□□ -0.46
CNOT1-213ENST00000568158 LDB3O75112 727 aa12.2□□□□□ -0.46
CNOT1-213ENST00000568158 ULK1O75385 1050 aa12.2□□□□□ -0.46
CNOT1-213ENST00000568158 SCELO95171 688 aa12.2□□□□□ -0.46
CNOT1-213ENST00000568158 ESRRBO95718 433 aa12.2□□□□□ -0.46
CNOT1-213ENST00000568158 KRT6AP02538 564 aa12.2□□□□□ -0.46
CNOT1-213ENST00000568158 KRT6BP04259 564 aa12.2□□□□□ -0.46
CNOT1-213ENST00000568158 KLK1P06870 262 aa12.2□□□□□ -0.46
CNOT1-213ENST00000568158 ITGAMP11215 1152 aa12.2□□□□□ -0.46
CNOT1-213ENST00000568158 PPP2R1BP30154 601 aa12.2□□□□□ -0.46
CNOT1-213ENST00000568158 KRT6CP48668 564 aa12.2□□□□□ -0.46
CNOT1-213ENST00000568158 PGDP52209 483 aa12.2□□□□□ -0.46
CNOT1-213ENST00000568158 HNRNPH2P55795 449 aaKnown RBP12.2□□□□□ -0.46
CNOT1-213ENST00000568158 C19orf57Q0VDD7 668 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms