RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 PHBP35232 272 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 MAGEA12P43365 314 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 TAS2R50P59544 299 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 SLC13A2Q13183 592 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 NAA30Q147X3 362 aaPredicted RBP13.68□□□□□ -0.22
FANCA-220ENST00000566409 SETDB1Q15047 1291 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 ACAP2Q15057 778 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 HIST2H2ACQ16777 129 aaPredicted RBP13.68□□□□□ -0.22
FANCA-220ENST00000566409 PFKFB4Q16877 469 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 FAM83EQ2M2I3 478 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 HIST2H2AA3Q6FI13 130 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 CCDC91Q7Z6B0 441 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 CLNKQ7Z7G1 428 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 ZNF595Q8IYB9 648 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 TEX9Q8N6V9 391 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 ACOT4Q8N9L9 421 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 ARMC2Q8NEN0 867 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 B3GNT7Q8NFL0 401 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 SLC44A1Q8WWI5 657 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 KCNC2Q96PR1 638 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 MAPKAP1Q9BPZ7 522 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 SORBS1Q9BX66 1292 aaKnown RBP13.68□□□□□ -0.22
FANCA-220ENST00000566409 TRIM45Q9H8W5 580 aaPredicted RBP13.68□□□□□ -0.22
FANCA-220ENST00000566409 PNO1Q9NRX1 252 aaKnown RBP13.68□□□□□ -0.22
FANCA-220ENST00000566409 EML6Q6ZMW3 1958 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 A0A088AWK7 358 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 ASPDHA6ND91 283 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 TMEM200CA6NKL6 621 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 SYCE1LA8MT33 242 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 SAP18O00422 153 aaKnown RBP13.67□□□□□ -0.22
FANCA-220ENST00000566409 CLDN4O14493 209 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 PRKNO60260 465 aaPredicted RBP13.67□□□□□ -0.22
FANCA-220ENST00000566409 CTNSO60931 367 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 SCELO95171 688 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 UNC5CO95185 931 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 CRYABP02511 175 aaKnown RBP13.67□□□□□ -0.22
FANCA-220ENST00000566409 SP1P08047 785 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 MYBL2P10244 700 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 PCNAP12004 261 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 EPB42P16452 691 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 ZNF10P21506 573 aaPredicted RBP13.67□□□□□ -0.22
FANCA-220ENST00000566409 SERPINB8P50452 374 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 ALDH18A1P54886 795 aaKnown RBP13.67□□□□□ -0.22
FANCA-220ENST00000566409 OC90Q02509 493 aaPredicted RBP13.67□□□□□ -0.22
FANCA-220ENST00000566409 TERF2Q15554 542 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 C1QL3Q5VWW1 255 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 GRHL2Q6ISB3 625 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 MED27Q6P2C8 311 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 GFRALQ6UXV0 394 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 GALNTL5Q7Z4T8 443 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 THAP3Q8WTV1 239 aaPredicted RBP13.67□□□□□ -0.22
FANCA-220ENST00000566409 ISL2Q96A47 359 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 FMO2Q99518 471 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 TBCDQ9BTW9 1192 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 DEFB126Q9BYW3 111 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 OR51B5Q9H339 312 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 LRFN1Q9P244 771 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 MTRF1LQ9UGC7 380 aaKnown RBP13.67□□□□□ -0.22
FANCA-220ENST00000566409 ABCA12Q86UK0 2595 aa13.67□□□□□ -0.22
FANCA-220ENST00000566409 TRBV11-1A0A0K0K1C0 115 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 CCDC189A1A4V9 331 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 SIX3O95343 332 aaPredicted RBP13.66□□□□□ -0.22
FANCA-220ENST00000566409 CTAGE8P0CG41 777 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 GFAPP14136 432 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 CD46P15529 392 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 HIST1H1TP22492 207 aaPredicted RBP13.66□□□□□ -0.22
FANCA-220ENST00000566409 HPDP32754 393 aaPredicted RBP13.66□□□□□ -0.22
FANCA-220ENST00000566409 TRHRP34981 398 aaPredicted RBP13.66□□□□□ -0.22
FANCA-220ENST00000566409 CLCN2P51788 898 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 TGM3Q08188 693 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 PCBP2Q15366 365 aaKnown RBP eCLIP13.66□□□□□ -0.221e-11■■■□□ 15.2
FANCA-220ENST00000566409 TMEM35AQ53FP2 167 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 GLE1Q53GS7 698 aaKnown RBP13.66□□□□□ -0.22
FANCA-220ENST00000566409 TECRLQ5HYJ1 363 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 RNFT1Q5M7Z0 435 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 DEPDC1Q5TB30 811 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 KHDRBS2Q5VWX1 349 aaKnown RBP13.66□□□□□ -0.22
FANCA-220ENST00000566409 SLC25A25Q6KCM7 469 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 C16orf47Q6ZP98 133 aaPredicted RBP13.66□□□□□ -0.22
FANCA-220ENST00000566409 MAMDC2Q7Z304 686 aaPredicted RBP13.66□□□□□ -0.22
FANCA-220ENST00000566409 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.66□□□□□ -0.22
FANCA-220ENST00000566409 FJX1Q86VR8 437 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 CTAGE4Q8IX94 777 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 MNS1Q8NEH6 495 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 HUS1BQ8NHY5 278 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 UHMK1Q8TAS1 419 aaKnown RBP13.66□□□□□ -0.22
FANCA-220ENST00000566409 ADAMTS18Q8TE60 1221 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 PTPMT1Q8WUK0 201 aaPredicted RBP13.66□□□□□ -0.22
FANCA-220ENST00000566409 UBE2E3Q969T4 207 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 NCLNQ969V3 563 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 RELTQ969Z4 430 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 FRMD6Q96NE9 622 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 PAFAH2Q99487 392 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 MTERF1Q99551 399 aaKnown RBP13.66□□□□□ -0.22
FANCA-220ENST00000566409 VPS11Q9H270 941 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 COPS7BQ9H9Q2 264 aaPredicted RBP13.66□□□□□ -0.22
FANCA-220ENST00000566409 LYRM4Q9HD34 91 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 SEC14L3Q9UDX4 400 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 VTI1BQ9UEU0 232 aa13.66□□□□□ -0.22
FANCA-220ENST00000566409 MRPS33Q9Y291 106 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms