RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 TGFB1P01137 390 aa11.52□□□□□ -0.57
SPG7-211ENST00000565370 BTG2P78543 158 aa11.52□□□□□ -0.57
SPG7-211ENST00000565370 RUNX2Q13950 521 aa11.52□□□□□ -0.57
SPG7-211ENST00000565370 UBAP2LQ14157 1087 aaKnown RBP11.52□□□□□ -0.57
SPG7-211ENST00000565370 ACER2Q5QJU3 275 aa11.52□□□□□ -0.57
SPG7-211ENST00000565370 TTC19Q6DKK2 380 aaPredicted RBP11.52□□□□□ -0.57
SPG7-211ENST00000565370 CRLF3Q8IUI8 442 aa11.52□□□□□ -0.57
SPG7-211ENST00000565370 SHISA5Q8N114 240 aa11.52□□□□□ -0.57
SPG7-211ENST00000565370 BEST3Q8N1M1 668 aa11.52□□□□□ -0.57
SPG7-211ENST00000565370 PLD6Q8N2A8 252 aaKnown RBP11.52□□□□□ -0.57
SPG7-211ENST00000565370 HORMAD2Q8N7B1 307 aa11.52□□□□□ -0.57
SPG7-211ENST00000565370 HUS1BQ8NHY5 278 aa11.52□□□□□ -0.57
SPG7-211ENST00000565370 RGMAQ96B86 450 aa11.52□□□□□ -0.57
SPG7-211ENST00000565370 C19orf60Q96EN9 201 aa11.52□□□□□ -0.57
SPG7-211ENST00000565370 UTP23Q9BRU9 249 aaKnown RBP11.52□□□□□ -0.57
SPG7-211ENST00000565370 PPCSQ9HAB8 311 aa11.52□□□□□ -0.57
SPG7-211ENST00000565370 ADAP2Q9NPF8 381 aa11.52□□□□□ -0.57
SPG7-211ENST00000565370 NECTIN3Q9NQS3 549 aa11.52□□□□□ -0.57
SPG7-211ENST00000565370 MS4A12Q9NXJ0 267 aa11.52□□□□□ -0.57
SPG7-211ENST00000565370 STMN3Q9NZ72 180 aa11.52□□□□□ -0.57
SPG7-211ENST00000565370 PHF11Q9UIL8 331 aa11.52□□□□□ -0.57
SPG7-211ENST00000565370 PCTPQ9UKL6 214 aa11.52□□□□□ -0.57
SPG7-211ENST00000565370 TSC22D4Q9Y3Q8 395 aa11.52□□□□□ -0.57
SPG7-211ENST00000565370 FLNCQ14315 2725 aa11.52□□□□□ -0.57
SPG7-211ENST00000565370 ANKUB1A6NFN9 424 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 LRRC14BA6NHZ5 514 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 GABRR3A8MPY1 467 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 FAM227AF5H4B4 570 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 H0YIV9 168 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 DYRK3O43781 588 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 DNAJB6O75190 326 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 RASAL1O95294 804 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 SIX3O95343 332 aaPredicted RBP11.51□□□□□ -0.57
SPG7-211ENST00000565370 TBX6O95947 436 aaPredicted RBP11.51□□□□□ -0.57
SPG7-211ENST00000565370 F10P00742 488 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 IFNA16P05015 189 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 COX7A2P14406 83 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 ATP5A1P25705 553 aaKnown RBP11.51□□□□□ -0.57
SPG7-211ENST00000565370 TNFRSF8P28908 595 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 PPP2R1BP30154 601 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 BUD31P41223 144 aaPredicted RBP11.51□□□□□ -0.57
SPG7-211ENST00000565370 CLCN2P51788 898 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 ARFIP1P53367 373 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 OC90Q02509 493 aaPredicted RBP11.51□□□□□ -0.57
SPG7-211ENST00000565370 STX4Q12846 297 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 MRPL49Q13405 166 aaKnown RBP11.51□□□□□ -0.57
SPG7-211ENST00000565370 SERTAD2Q14140 314 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 ELAVL1Q15717 326 aaKnown RBP11.51□□□□□ -0.57
SPG7-211ENST00000565370 CPSF6Q16630 551 aaKnown RBP eCLIP11.51□□□□□ -0.57
SPG7-211ENST00000565370 FCRLBQ6BAA4 426 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 H3F3CQ6NXT2 135 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 ADGRD1Q6QNK2 874 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 TIFABQ6ZNK6 161 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 NUDT13Q86X67 352 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 GSPT2Q8IYD1 628 aaKnown RBP11.51□□□□□ -0.57
SPG7-211ENST00000565370 ACOT4Q8N9L9 421 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 L3MBTL4Q8NA19 623 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 TMEM178AQ8NBL3 297 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 FAM98AQ8NCA5 519 aaKnown RBP11.51□□□□□ -0.57
SPG7-211ENST00000565370 ST6GALNAC3Q8NDV1 305 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 CATSPER1Q8NEC5 780 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 B3GNT7Q8NFL0 401 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 ACMSDQ8TDX5 336 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 ELP5Q8TE02 316 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 GRHL3Q8TE85 626 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 FAR1Q8WVX9 515 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 UBLCP1Q8WVY7 318 aaPredicted RBP11.51□□□□□ -0.57
SPG7-211ENST00000565370 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.51□□□□□ -0.57
SPG7-211ENST00000565370 DAZLQ92904 295 aaKnown RBP11.51□□□□□ -0.57
SPG7-211ENST00000565370 VMP1Q96GC9 406 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 C5orf34Q96MH7 638 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 CSF3RQ99062 836 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 MTERF1Q99551 399 aaKnown RBP11.51□□□□□ -0.57
SPG7-211ENST00000565370 DEFB126Q9BYW3 111 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 OR51B5Q9H339 312 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 NOL11Q9H8H0 719 aaKnown RBP11.51□□□□□ -0.57
SPG7-211ENST00000565370 L2HGDHQ9H9P8 463 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 PNO1Q9NRX1 252 aaKnown RBP11.51□□□□□ -0.57
SPG7-211ENST00000565370 OLAHQ9NV23 265 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 ZNF358Q9NW07 568 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 PLA2G3Q9NZ20 509 aa11.51□□□□□ -0.57
SPG7-211ENST00000565370 PRRC2CQ9Y520 2896 aaKnown RBP11.5□□□□□ -0.57
SPG7-211ENST00000565370 TRBV11-1A0A0K0K1C0 115 aa11.5□□□□□ -0.57
SPG7-211ENST00000565370 A8MT66 165 aa11.5□□□□□ -0.57
SPG7-211ENST00000565370 A8MUA0 341 aa11.5□□□□□ -0.57
SPG7-211ENST00000565370 RTCAO00442 366 aaKnown RBP11.5□□□□□ -0.57
SPG7-211ENST00000565370 SH3BGRLO75368 114 aa11.5□□□□□ -0.57
SPG7-211ENST00000565370 MLYCDO95822 493 aa11.5□□□□□ -0.57
SPG7-211ENST00000565370 OTCP00480 354 aa11.5□□□□□ -0.57
SPG7-211ENST00000565370 CRYABP02511 175 aaKnown RBP11.5□□□□□ -0.57
SPG7-211ENST00000565370 RPS17P08708 135 aaKnown RBP11.5□□□□□ -0.57
SPG7-211ENST00000565370 FAM153BP0C7A2 387 aa11.5□□□□□ -0.57
SPG7-211ENST00000565370 EDN3P14138 238 aa11.5□□□□□ -0.57
SPG7-211ENST00000565370 CD46P15529 392 aa11.5□□□□□ -0.57
SPG7-211ENST00000565370 CPN2P22792 545 aa11.5□□□□□ -0.57
SPG7-211ENST00000565370 PTX3P26022 381 aaPredicted RBP11.5□□□□□ -0.57
SPG7-211ENST00000565370 TLX1P31314 330 aaPredicted RBP11.5□□□□□ -0.57
SPG7-211ENST00000565370 RPS13P62277 151 aaKnown RBP11.5□□□□□ -0.57
SPG7-211ENST00000565370 IFT88Q13099 833 aa11.5□□□□□ -0.57
SPG7-211ENST00000565370 SLC29A2Q14542 456 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms