RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 DEFB126Q9BYW3 111 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 NACAP1Q9BZK3 213 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 NMUR1Q9HB89 426 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 ITGA11Q9UKX5 1188 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 SNX7Q9UNH6 387 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 FBXO7Q9Y3I1 522 aa2.3□□□□□ -2.04
HMGB1P33-201ENST00000563485 ZSCAN5CA6NGD5 496 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P33-201ENST00000563485 LRRTM2O43300 516 aa2.29□□□□□ -2.04
HMGB1P33-201ENST00000563485 PPIP5K2O43314 1243 aa2.29□□□□□ -2.04
HMGB1P33-201ENST00000563485 B4GAT1O43505 415 aa2.29□□□□□ -2.04
HMGB1P33-201ENST00000563485 FCGR3BO75015 233 aa2.29□□□□□ -2.04
HMGB1P33-201ENST00000563485 PGLSO95336 258 aa2.29□□□□□ -2.04
HMGB1P33-201ENST00000563485 FGF19O95750 216 aa2.29□□□□□ -2.04
HMGB1P33-201ENST00000563485 CALCAP01258 141 aa2.29□□□□□ -2.04
HMGB1P33-201ENST00000563485 ZNF273Q14593 569 aa2.29□□□□□ -2.04
HMGB1P33-201ENST00000563485 C6orf136Q5SQH8 315 aa2.29□□□□□ -2.04
HMGB1P33-201ENST00000563485 CGB2Q6NT52 195 aa2.29□□□□□ -2.04
HMGB1P33-201ENST00000563485 ZNF600Q6ZNG1 722 aa2.29□□□□□ -2.04
HMGB1P33-201ENST00000563485 RFPL4BQ6ZWI9 263 aa2.29□□□□□ -2.04
HMGB1P33-201ENST00000563485 ZNF781Q8N8C0 355 aa2.29□□□□□ -2.04
HMGB1P33-201ENST00000563485 HEXDCQ8WVB3 486 aa2.29□□□□□ -2.04
HMGB1P33-201ENST00000563485 SLC35C1Q96A29 364 aa2.29□□□□□ -2.04
HMGB1P33-201ENST00000563485 SH3GLB2Q9NR46 395 aa2.29□□□□□ -2.04
HMGB1P33-201ENST00000563485 ZNF275Q9NSD4 429 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P33-201ENST00000563485 NOCTQ9UK39 431 aaKnown RBP2.29□□□□□ -2.04
HMGB1P33-201ENST00000563485 HBS1LQ9Y450 684 aaKnown RBP2.29□□□□□ -2.04
HMGB1P33-201ENST00000563485 PCDHGA1Q9Y5H4 931 aa2.29□□□□□ -2.04
HMGB1P33-201ENST00000563485 ZNF724A8MTY0 619 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 A8MXE2 369 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 ZNF487B1APH4 448 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 E7ENQ6 273 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 FAM86B1E9PN63 330 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 CCDC188H7C350 402 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 E2F3O00716 465 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 P2RX6O15547 441 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 TSC22D2O75157 780 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 TBX10O75333 385 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 RHBDL1O75783 438 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 FAM86B2P0C5J1 330 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 SRD5A2P31213 254 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 CRKLP46109 303 aaKnown RBP2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 HMGCS2P54868 508 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 PTENP60484 403 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 CRMP1Q14194 572 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 KHDRBS2Q5VWX1 349 aaKnown RBP2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 REP15Q6BDI9 236 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 DNAJB7Q7Z6W7 309 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 TDHQ8IZJ6 230 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 CCAR2Q8N163 923 aaKnown RBP2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 NME8Q8N427 588 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 OR13C5Q8NGS8 318 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 ST6GALNAC6Q969X2 333 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 VPS33AQ96AX1 596 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 BPIFA2Q96DR5 249 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 ZBP1Q9H171 429 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 UBE2TQ9NPD8 197 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 CLEC4EQ9ULY5 219 aa2.28□□□□□ -2.04
HMGB1P33-201ENST00000563485 P4HA2O15460 535 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 ACSL4O60488 711 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 ANKRD34CP0C6C1 535 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 OR9G9P0C7N8 305 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 BRCC3P46736 316 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 RGRP47804 291 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 RPP38P78345 283 aaKnown RBP2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 ABRAXAS2Q15018 415 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 RASA2Q15283 850 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 C17orf58Q2M2W7 97 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 ARMCX4Q5H9R4 360 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 MFSD4BQ5TF39 518 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 PLPP4Q5VZY2 271 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 TXNRD3NBQ6F5E7 133 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 TMEM182Q6ZP80 229 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 CHST3Q7LGC8 479 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 CCDC71Q8IV32 467 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 ZNF525Q8N782 197 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 IQUBQ8NA54 791 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 OCC1Q8TAD7 63 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 TXLNGYQ9BZA5 131 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 UBA5Q9GZZ9 404 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 MTIF3Q9H2K0 278 aaKnown RBP2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 ASB8Q9H765 288 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 LMAN1LQ9HAT1 526 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 ANKEF1Q9NU02 776 aa2.27□□□□□ -2.05
HMGB1P33-201ENST00000563485 C2orf92A0A1B0GVN3 265 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 OR5H15A6NDH6 313 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 ANXA2P2A6NMY6 339 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 TMCO5BA8MYB1 307 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 CCDC175P0C221 793 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 KRT3P12035 628 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 SKILP12757 684 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 EEF1DP29692 281 aaKnown RBP2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 HMGCLP35914 325 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 RAD52P43351 418 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 OR3A1P47881 315 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 MEOX2P50222 304 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 GPR50Q13585 617 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 HERC4Q5GLZ8 1057 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 TCP11X2Q5H9J9 407 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms