RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 APLFQ8IW19 511 aaPredicted RBP19.1■□□□□ 0.65
TSPAN3-207ENST00000559494 TMEM52Q8NDY8 209 aa19.1■□□□□ 0.65
TSPAN3-207ENST00000559494 OR11G2Q8NGC1 345 aa19.1■□□□□ 0.65
TSPAN3-207ENST00000559494 TRIM55Q9BYV6 548 aa19.1■□□□□ 0.65
TSPAN3-207ENST00000559494 ING2Q9H160 280 aa19.1■□□□□ 0.65
TSPAN3-207ENST00000559494 LYRM4Q9HD34 91 aa19.1■□□□□ 0.65
TSPAN3-207ENST00000559494 MLXIPLQ9NP71 852 aa19.1■□□□□ 0.65
TSPAN3-207ENST00000559494 SLC12A4Q9UP95 1085 aa19.1■□□□□ 0.65
TSPAN3-207ENST00000559494 DOCK10Q96BY6 2186 aa19.09■□□□□ 0.65
TSPAN3-207ENST00000559494 NUP210LQ5VU65 1888 aa19.09■□□□□ 0.65
TSPAN3-207ENST00000559494 LOC102723996A0A087X1L8 192 aa19.09■□□□□ 0.65
TSPAN3-207ENST00000559494 SERTM1A2A2V5 107 aa19.09■□□□□ 0.65
TSPAN3-207ENST00000559494 CYC1P08574 325 aa19.09■□□□□ 0.65
TSPAN3-207ENST00000559494 HSD3B1P14060 373 aa19.09■□□□□ 0.65
TSPAN3-207ENST00000559494 HSD3B2P26439 372 aa19.09■□□□□ 0.65
TSPAN3-207ENST00000559494 HNRNPFP52597 415 aaKnown RBP19.09■□□□□ 0.65
TSPAN3-207ENST00000559494 SLC18A1P54219 525 aa19.09■□□□□ 0.65
TSPAN3-207ENST00000559494 TTMPQ5BVD1 217 aa19.09■□□□□ 0.65
TSPAN3-207ENST00000559494 METTL4Q8N3J2 472 aa19.09■□□□□ 0.65
TSPAN3-207ENST00000559494 ZCCHC7Q8N3Z6 543 aaKnown RBP19.09■□□□□ 0.65
TSPAN3-207ENST00000559494 TMEM102Q8N9M5 508 aaPredicted RBP19.09■□□□□ 0.65
TSPAN3-207ENST00000559494 SREK1Q8WXA9 508 aaKnown RBP19.09■□□□□ 0.65
TSPAN3-207ENST00000559494 CSF3RQ99062 836 aa19.09■□□□□ 0.65
TSPAN3-207ENST00000559494 MRPL1Q9BYD6 325 aaKnown RBP19.09■□□□□ 0.65
TSPAN3-207ENST00000559494 VPS29Q9UBQ0 182 aa19.09■□□□□ 0.65
TSPAN3-207ENST00000559494 FBXL4Q9UKA2 621 aa19.09■□□□□ 0.65
TSPAN3-207ENST00000559494 FAM208BQ5VWN6 2430 aa19.09■□□□□ 0.65
TSPAN3-207ENST00000559494 A0A0A6YYD5 115 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 ERVH48-1M5A8F1 160 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 AZIN1O14977 448 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 TMPRSS11DO60235 418 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 DNAJB5O75953 348 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 FGF4P08620 206 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 C8orf89P0DMQ9 161 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 UROSP10746 265 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 JAK1P23458 1154 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 HMGCS1Q01581 520 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 ZNF33BQ06732 778 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 GALNT1Q10472 559 aaPredicted RBP19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 TBL3Q12788 808 aaKnown RBP19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 CSTF3Q12996 717 aaKnown RBP19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 CHI3L2Q15782 390 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 DCAF10Q5QP82 559 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 HHATQ5VTY9 493 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 CLEC6AQ6EIG7 209 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 MRM1Q6IN84 353 aaKnown RBP19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 LANCL3Q6ZV70 420 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 EXD3Q8N9H8 876 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 FAM47BQ8NA70 645 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 METTL21AQ8WXB1 218 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 TSLPQ969D9 159 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 ATP6V1G3Q96LB4 118 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 FER1L6-AS2Q96M78 137 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 PTCHD1Q96NR3 888 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 ACPTQ9BZG2 426 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 ZNF446Q9NWS9 450 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 AHSPQ9NZD4 102 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 FBXW2Q9UKT8 454 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 ASB4Q9Y574 426 aa19.08■□□□□ 0.65
TSPAN3-207ENST00000559494 PCDH17O14917 1159 aa19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 PRMT3O60678 531 aa19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 CRCPO75575 148 aa19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 GBAP04062 536 aa19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 KLK1P06870 262 aa19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 FAM87AP0C7U9 286 aa19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 ACPPP15309 386 aa19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 SERPINB5P36952 375 aa19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 CCL11P51671 97 aa19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 HNRNPH2P55795 449 aaKnown RBP19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 EEF1A2Q05639 463 aaKnown RBP19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 NSDHLQ15738 373 aa19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 QSOX2Q6ZRP7 698 aa19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 ANKRD37Q7Z713 158 aa19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 AMER2Q8N7J2 671 aa19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 GBP7Q8N8V2 638 aaPredicted RBP19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 ADAMTS18Q8TE60 1221 aa19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 CHTF18Q8WVB6 975 aa19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 PAIP2Q9BPZ3 127 aaKnown RBP19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 ZNF395Q9H8N7 513 aaPredicted RBP19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 EML4Q9HC35 981 aaKnown RBP19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 NECTIN3Q9NQS3 549 aa19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 NMRK1Q9NWW6 199 aa19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 ATG4BQ9Y4P1 393 aa19.07■□□□□ 0.64
TSPAN3-207ENST00000559494 IGHV3-20A0A0C4DH32 117 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 A0A1W2PQ72 361 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 ITM2AO43736 263 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 SERPINE1P05121 402 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 COX6A1P12074 109 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 MAOAP21397 527 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 BGNP21810 368 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 TPP2P29144 1249 aaPredicted RBP19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 RRADP55042 308 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 POLE2P56282 527 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 PCOLCEQ15113 449 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 UGT3A2Q3SY77 523 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 NDUFAF7Q7L592 441 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 COMMD6Q7Z4G1 85 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 TRIM46Q7Z4K8 759 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 CPEB2Q7Z5Q1 589 aaKnown RBP19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 GPR180Q86V85 440 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms