RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 E2F2Q14209 437 aa12.61□□□□□ -0.39
VPS18-203ENST00000558855 ZNF630Q2M218 657 aaPredicted RBP12.61□□□□□ -0.39
VPS18-203ENST00000558855 CMPK2Q5EBM0 449 aa12.61□□□□□ -0.39
VPS18-203ENST00000558855 DGAT2L6Q6ZPD8 337 aa12.61□□□□□ -0.39
VPS18-203ENST00000558855 ISCA2Q86U28 154 aa12.61□□□□□ -0.39
VPS18-203ENST00000558855 DOK4Q8TEW6 326 aa12.61□□□□□ -0.39
VPS18-203ENST00000558855 KIAA1191Q96A73 305 aa12.61□□□□□ -0.39
VPS18-203ENST00000558855 CPNE1Q99829 537 aa12.61□□□□□ -0.39
VPS18-203ENST00000558855 MS4A8Q9BY19 250 aa12.61□□□□□ -0.39
VPS18-203ENST00000558855 REXO4Q9GZR2 422 aaKnown RBP12.61□□□□□ -0.39
VPS18-203ENST00000558855 CLK4Q9HAZ1 481 aaKnown RBP12.61□□□□□ -0.39
VPS18-203ENST00000558855 IGSF5Q9NSI5 407 aa12.61□□□□□ -0.39
VPS18-203ENST00000558855 GPRC5BQ9NZH0 403 aa12.61□□□□□ -0.39
VPS18-203ENST00000558855 SUCOQ9UBS9 1254 aaKnown RBP12.61□□□□□ -0.39
VPS18-203ENST00000558855 FBXW2Q9UKT8 454 aa12.61□□□□□ -0.39
VPS18-203ENST00000558855 DAPP1Q9UN19 280 aa12.61□□□□□ -0.39
VPS18-203ENST00000558855 KLF2Q9Y5W3 355 aaPredicted RBP12.61□□□□□ -0.39
VPS18-203ENST00000558855 CELSR1Q9NYQ6 3014 aa12.61□□□□□ -0.39
VPS18-203ENST00000558855 DNAJC13O75165 2243 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 URADA6NGE7 173 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 G3V3Y1 287 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 SAP18O00422 153 aaKnown RBP12.6□□□□□ -0.39
VPS18-203ENST00000558855 HS6ST1O60243 411 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 CCNT2O60583 730 aaKnown RBP12.6□□□□□ -0.39
VPS18-203ENST00000558855 LDB3O75112 727 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 PRKRAO75569 313 aaKnown RBP12.6□□□□□ -0.39
VPS18-203ENST00000558855 STK16O75716 305 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 OR6B1O95007 311 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 MTHFD2P13995 350 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 STMN1P16949 149 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 TFEBP19484 476 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 CLCN2P51788 898 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 SLC12A2P55011 1212 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 KRTAP10-9P60411 292 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 RAB10P61026 200 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 SKP1P63208 163 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 RBPJQ06330 500 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 SLC13A2Q13183 592 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 CHIT1Q13231 466 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 BMPR2Q13873 1038 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 PDK4Q16654 411 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 NIPAL1Q6NVV3 410 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 C3orf62Q6ZUJ4 267 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 CTAGE3PQ8IX95 158 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 CENPLQ8N0S6 344 aaPredicted RBP12.6□□□□□ -0.39
VPS18-203ENST00000558855 CYP4Z2PQ8N1L4 340 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 PPM1NQ8N819 430 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 OR52N2Q8NGI0 321 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 FBF1Q8TES7 1133 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 ZNF473Q8WTR7 871 aaKnown RBP12.6□□□□□ -0.39
VPS18-203ENST00000558855 PTPMT1Q8WUK0 201 aaPredicted RBP12.6□□□□□ -0.39
VPS18-203ENST00000558855 KCTD4Q8WVF5 259 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 ANKRD9Q96BM1 317 aaPredicted RBP12.6□□□□□ -0.39
VPS18-203ENST00000558855 PTCD3Q96EY7 689 aaKnown RBP12.6□□□□□ -0.39
VPS18-203ENST00000558855 FAR2Q96K12 515 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 NPLQ9BXD5 320 aaPredicted RBP12.6□□□□□ -0.39
VPS18-203ENST00000558855 EHD1Q9H4M9 534 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 NSMCE4AQ9NXX6 385 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 CD274Q9NZQ7 290 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 LIPGQ9Y5X9 500 aa12.6□□□□□ -0.39
VPS18-203ENST00000558855 FREM3P0C091 2139 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 A0A1B0GTH9 108 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 ESYT3A0FGR9 886 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 ANKDD1BA6NHY2 528 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 WASHC1A8K0Z3 465 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 HRKO00198 91 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 WWP2O00308 870 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 CLGNO14967 610 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 EIF3HO15372 352 aaKnown RBP eCLIP12.59□□□□□ -0.39
VPS18-203ENST00000558855 B3GALT2O43825 422 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 PEX1O43933 1283 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 H2AFYO75367 372 aaKnown RBP12.59□□□□□ -0.39
VPS18-203ENST00000558855 OR2J2O76002 312 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 SOX3P41225 446 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 MSH2P43246 934 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 PLTPP55058 493 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 MTTPP55157 894 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 HSD17B7P56937 341 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 GUCY2DQ02846 1103 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 SLMAPQ14BN4 828 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 TERF2Q15554 542 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 KRTCAP3Q53RY4 240 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 EMC4Q5J8M3 183 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 SULT1C3Q6IMI6 304 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 TRIM40Q6P9F5 258 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 RPTNQ6XPR3 784 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 CCDC25Q86WR0 208 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 KRT78Q8N1N4 520 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 GHDCQ8N2G8 530 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 TTLQ8NG68 377 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 UCN3Q969E3 161 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 NXNL1Q96CM4 212 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 VMP1Q96GC9 406 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 SERINC2Q96SA4 455 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 CD244Q9BZW8 370 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 ADAP2Q9NPF8 381 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 RNF112Q9ULX5 631 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.59□□□□□ -0.39
VPS18-203ENST00000558855 ARHGAP21Q5T5U3 1957 aa12.59□□□□□ -0.39
VPS18-203ENST00000558855 KIAA1549Q9HCM3 1950 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms