RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 C11orf53Q8IXP5 236 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 THNSL1Q8IYQ7 743 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 ZBED8Q8IZ13 594 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 ELMOD1Q8N336 334 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 SMYD1Q8NB12 490 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 C11orf52Q96A22 123 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 TNFRSF13CQ96RJ3 184 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 INTS14Q96SY0 518 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 TRIM7Q9C029 511 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 TSPY26PQ9H489 355 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 C5orf66Q9H5L9 145 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 DEPPQ9NTK1 212 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 RAI14Q9P0K7 980 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 ABCD2Q9UBJ2 740 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 XPO7Q9UIA9 1087 aaKnown RBP2.63□□□□□ -1.99
SPG11-206ENST00000558093 SH3GLB1Q9Y371 365 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 RRP15Q9Y3B9 282 aaKnown RBP2.63□□□□□ -1.99
SPG11-206ENST00000558093 PCDHGA1Q9Y5H4 931 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 A0A087WWV3 80 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 ZNF840PA6NDX5 716 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 A8MU10 97 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 ZNF732B4DXR9 585 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 LMO7DNF2Z398 122 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 MPHOSPH10O00566 681 aaKnown RBP2.62□□□□□ -1.99
SPG11-206ENST00000558093 CPLX1O14810 134 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 B4GAT1O43505 415 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 ANGPTL1O95841 491 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 ANKRD34CP0C6C1 535 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 DLATP10515 647 aaKnown RBP2.62□□□□□ -1.99
SPG11-206ENST00000558093 CTNNA1P35221 906 aaKnown RBP2.62□□□□□ -1.99
SPG11-206ENST00000558093 ANP32AP39687 249 aaKnown RBP2.62□□□□□ -1.99
SPG11-206ENST00000558093 MATKP42679 507 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 SLC1A4P43007 532 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 NPBWR1P48145 328 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 GSK3BP49841 420 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 FOLH1Q04609 750 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 RBBP4Q09028 425 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 PKN2Q16513 984 aaKnown RBP2.62□□□□□ -1.99
SPG11-206ENST00000558093 TMEM44Q2T9K0 475 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 C9orf66Q5T8R8 295 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 LEMD1Q68G75 181 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 PLBD1Q6P4A8 553 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 CASC4Q6P4E1 433 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 EMBQ6PCB8 327 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 CATSPER4Q7RTX7 472 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 SPATA19Q7Z5L4 167 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 SLC43A2Q8N370 569 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 BANPQ8N9N5 519 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 Q8NFD4 153 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 OR13C5Q8NGS8 318 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 KIAA1524Q8TCG1 905 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 MGARPQ8TDB4 240 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.62□□□□□ -1.99
SPG11-206ENST00000558093 AFAP1L1Q8TED9 768 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 AGAP11Q8TF27 550 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 SMPDL3AQ92484 453 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 TAF4BQ92750 862 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 PINK1Q9BXM7 581 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 MINDY3Q9H8M7 445 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 MARCH7Q9H992 704 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 PLEKHA3Q9HB20 300 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 NMUR1Q9HB89 426 aa2.62□□□□□ -1.99
SPG11-206ENST00000558093 RABL2AQ9UBK7 228 aaPredicted RBP2.62□□□□□ -1.99
SPG11-206ENST00000558093 GPRASP1Q5JY77 1395 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 A0A0B4J203 849 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 TRAV34A0A0B4J273 112 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 IGHV3-16A0A0C4DH30 117 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 CCDC162PA2VCL2 907 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 KLLNB2CW77 178 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 BOLA2-SMG1P6H3BVE0 249 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 K7EQG2 157 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 TXNL1O43396 289 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 SCO2O43819 266 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 GRAP2O75791 330 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 SLC4A1P02730 911 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 RLN1P04808 185 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 QDPRP09417 244 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 SOAT1P35610 550 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 ATP6V1E1P36543 226 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 KRT83P78385 493 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 ITPK1Q13572 414 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 RUNX3Q13761 415 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 TWISTNBQ3B726 338 aaPredicted RBP2.61□□□□□ -1.99
SPG11-206ENST00000558093 RNLSQ5VYX0 342 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 GALNT17Q6IS24 598 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 KRTAP5-4Q6L8H1 288 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 PET117Q6UWS5 81 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 METTL23Q86XA0 190 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 LRRC49Q8IUZ0 686 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 CD177Q8N6Q3 437 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 TEX9Q8N6V9 391 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 CSNK1G2-AS1Q8NCQ2 148 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 KIAA0895Q8NCT3 520 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 OR8H1Q8NGG4 311 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 OR6F1Q8NGZ6 308 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 OCC1Q8TAD7 63 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 LIPHQ8WWY8 451 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 NABP1Q96AH0 204 aa2.61□□□□□ -1.99
SPG11-206ENST00000558093 BPIFA2Q96DR5 249 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms