RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 RTKNQ9BST9 563 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 EFCAB1Q9HAE3 211 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 TEX10Q9NXF1 929 aaPredicted RBP15.97■□□□□ 0.15
SNX1-203ENST00000558040 EHD3Q9NZN3 535 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 LEF1Q9UJU2 399 aaPredicted RBP15.97■□□□□ 0.15
SNX1-203ENST00000558040 DAPP1Q9UN19 280 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 LAMA1P25391 3075 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 VPS13AQ96RL7 3174 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 A0A0A6YYC8 382 aaPredicted RBP15.96■□□□□ 0.15
SNX1-203ENST00000558040 C1orf226A1L170 272 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 ZNF860A6NHJ4 632 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 I3L1I5 382 aaPredicted RBP15.96■□□□□ 0.15
SNX1-203ENST00000558040 SGK494L7N484 410 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 DSCR3O14972 297 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 ZNF749O43361 778 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 FOXS1O43638 330 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 TBX19O60806 448 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 RDH16O75452 317 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 MT-CO3P00414 261 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 PGRP06401 933 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 HBQ1P09105 142 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 T-ENOLP0DO92 83 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 NR2F6P10588 404 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 CAPN3P20807 821 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 CPN2P22792 545 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 CPA2P48052 419 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 ALDH9A1P49189 494 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 LIM2P55344 173 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 MXRA7P84157 204 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 MC2RQ01718 297 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 TNFRSF17Q02223 184 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 UGT8Q16880 541 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 ISXQ2M1V0 245 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 PRMT9Q6P2P2 845 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 RIPOR1Q6ZS17 1223 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 TTLL10Q6ZVT0 673 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 PRSS41Q7RTY9 318 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 TMEM126BQ8IUX1 230 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 KIAA2013Q8IYS2 634 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 NATD1Q8N6N6 113 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 VPS37AQ8NEZ2 397 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 OR7A2PQ8NGA2 310 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 OR8J2Q8NGG1 315 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 MMABQ96EY8 250 aaPredicted RBP15.96■□□□□ 0.15
SNX1-203ENST00000558040 LIN37Q96GY3 246 aaPredicted RBP15.96■□□□□ 0.15
SNX1-203ENST00000558040 OR52E6Q96RD3 313 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 MAPKAP1Q9BPZ7 522 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 RMND5AQ9H871 391 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 PRDM9Q9NQV7 894 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.96■□□□□ 0.15
SNX1-203ENST00000558040 OCIAD1Q9NX40 245 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 SH3BP4Q9P0V3 963 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 NDOR1Q9UHB4 597 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 CLCA2Q9UQC9 943 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 ATG4BQ9Y4P1 393 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 PCDHA9Q9Y5H5 950 aa15.96■□□□□ 0.15
SNX1-203ENST00000558040 A0A1B0GX78 115 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 GABRR3A8MPY1 467 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 B4E171 279 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 AGRPO00253 132 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 MRASO14807 208 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 POLR1CO15160 346 aaPredicted RBP15.95■□□□□ 0.14
SNX1-203ENST00000558040 PROM1O43490 865 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 GFRA3O60609 400 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 CSO75390 466 aaKnown RBP15.95■□□□□ 0.14
SNX1-203ENST00000558040 SCRG1O75711 98 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 AIFM1O95831 613 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 FGF5P12034 268 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 ALAS2P22557 587 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 TSPAN7P41732 249 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 GCGRP47871 477 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 DGKQP52824 942 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 RAB38P57729 211 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 SNRPNP63162 240 aaKnown RBP15.95■□□□□ 0.14
SNX1-203ENST00000558040 MC1RQ01726 317 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 ACTN3Q08043 901 aaPredicted RBP15.95■□□□□ 0.14
SNX1-203ENST00000558040 LRRC74AQ0VAA2 488 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 ART3Q13508 389 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 RUNX2Q13950 521 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 ANXA8L1Q5VT79 327 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 REP15Q6BDI9 236 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 DHRS13Q6UX07 377 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 TICAM1Q8IUC6 712 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 CA13Q8N1Q1 262 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 BMPERQ8N8U9 685 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 VPS33AQ96AX1 596 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 RCN3Q96D15 328 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 COQ8BQ96D53 544 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 DUSP26Q9BV47 211 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 BHLHE41Q9C0J9 482 aaPredicted RBP15.95■□□□□ 0.14
SNX1-203ENST00000558040 ACTR5Q9H9F9 607 aaPredicted RBP15.95■□□□□ 0.14
SNX1-203ENST00000558040 SLC52A3Q9NQ40 469 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 FBXO8Q9NRD0 319 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 FAM120CQ9NX05 1096 aaKnown RBP15.95■□□□□ 0.14
SNX1-203ENST00000558040 NDE1Q9NXR1 346 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 KCMF1Q9P0J7 381 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 EXO1Q9UQ84 846 aaKnown RBP15.95■□□□□ 0.14
SNX1-203ENST00000558040 PCDHB3Q9Y5E6 796 aa15.95■□□□□ 0.14
SNX1-203ENST00000558040 A0A1W2PR48 441 aa15.94■□□□□ 0.14
SNX1-203ENST00000558040 BLACEA4D250 179 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms