RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 GPR107Q5VW38 600 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 ZSWIM9Q86XI8 627 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 EHD1Q9H4M9 534 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 PELI2Q9HAT8 420 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 CIDEBQ9UHD4 219 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 CCL22O00626 93 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 MID1O15344 667 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 UGDHO60701 494 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 PORP16435 677 aaPredicted RBP8.05□□□□□ -1.12
CHD8-213ENST00000557364 ACTA2P62736 377 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 ACTG2P63267 376 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 LRRN1Q6UXK5 716 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 LRRN4Q8WUT4 740 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 HDAC2Q92769 488 aaKnown RBP8.05□□□□□ -1.12
CHD8-213ENST00000557364 KLHL21Q9UJP4 597 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 DLGAP4Q9Y2H0 992 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 RP1L1Q8IWN7 2480 aaPredicted RBP8.05□□□□□ -1.12
CHD8-213ENST00000557364 PTHP01270 115 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 ARF5P84085 180 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 GRIK2Q13002 908 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 DSC3Q14574 896 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 Q6ZVL8 140 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 ACVR1CQ8NER5 493 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 FGFBP2Q9BYJ0 223 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 POLR2J2Q9GZM3 115 aaKnown RBP8.05□□□□□ -1.12
CHD8-213ENST00000557364 FN3KQ9H479 309 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 TMEM45AQ9NWC5 275 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 SPO11Q9Y5K1 396 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 FAM170BA6NMN3 283 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 ZNF878C9JN71 531 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 MT-ND2P03891 347 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 MYCLP1P12525 358 aaPredicted RBP8.05□□□□□ -1.12
CHD8-213ENST00000557364 EDNRAP25101 427 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 ANKRD22Q5VYY1 191 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 S100A7AQ86SG5 101 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 CPXM2Q8N436 756 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 NETO2Q8NC67 525 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 VN1R2Q8NFZ6 395 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 AKAP1Q92667 903 aaKnown RBP eCLIP8.05□□□□□ -1.12
CHD8-213ENST00000557364 MYNNQ9NPC7 610 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 ABCD2Q9UBJ2 740 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 MCTS1Q9ULC4 181 aaKnown RBP8.05□□□□□ -1.12
CHD8-213ENST00000557364 EXOSC1Q9Y3B2 195 aaKnown RBP8.05□□□□□ -1.12
CHD8-213ENST00000557364 hCG_2039718K7EN88 272 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 SLC22A1O15245 554 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 GJB5O95377 273 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 C6P13671 934 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 PUDPQ08623 228 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 RAET1LQ5VY80 246 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 ENPP6Q6UWR7 440 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 RBM15BQ8NDT2 890 aaKnown RBP8.05□□□□□ -1.12
CHD8-213ENST00000557364 DNAAF1Q8NEP3 725 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 PYCR2Q96C36 320 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 MROQ9BYG7 248 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 TBC1D17Q9HA65 648 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 TPT1P8Q9HAU6 139 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 CCDC59Q9P031 241 aaKnown RBP8.05□□□□□ -1.12
CHD8-213ENST00000557364 KLHL42Q9P2K6 505 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 GFRA2O00451 464 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 H6PDO95479 791 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 PRKCGP05129 697 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 PTGIRP43119 386 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 AP2S1P53680 142 aaPredicted RBP8.05□□□□□ -1.12
CHD8-213ENST00000557364 YPEL5P62699 121 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 NSDHLQ15738 373 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 SWT1Q5T5J6 900 aaKnown RBP8.05□□□□□ -1.12
CHD8-213ENST00000557364 GLT8D1Q68CQ7 371 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 BAIAP2L2Q6UXY1 529 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 NKD1Q969G9 470 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 MAP3K3Q99759 626 aa8.05□□□□□ -1.12
CHD8-213ENST00000557364 POLDIP3Q9BY77 421 aaKnown RBP8.05□□□□□ -1.12
CHD8-213ENST00000557364 FAM155BO75949 473 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 TMBIM6P55061 237 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 KIAA0907Q7Z7F0 614 aaPredicted RBP8.04□□□□□ -1.12
CHD8-213ENST00000557364 TIGD4Q8IY51 512 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 ZNF709Q8N972 641 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 OR4F6Q8NGB9 312 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 HSPA12BQ96MM6 686 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 ERMAPQ96PL5 475 aaPredicted RBP8.04□□□□□ -1.12
CHD8-213ENST00000557364 SGIP1Q9BQI5 828 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 SCP2D1Q9UJQ7 156 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 PPM1HQ9ULR3 514 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 IGLON5A6NGN9 336 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 GLSO94925 669 aaPredicted RBP8.04□□□□□ -1.12
CHD8-213ENST00000557364 LEPRP48357 1165 aaKnown RBP8.04□□□□□ -1.12
CHD8-213ENST00000557364 TUBA1BP68363 451 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 TUBA4AP68366 448 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 LASP1Q14847 261 aaKnown RBP8.04□□□□□ -1.12
CHD8-213ENST00000557364 HMBOX1Q6NT76 420 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 TUBA1AQ71U36 451 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 ZNF280BQ86YH2 543 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 ZNF366Q8N895 744 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 PAPD5Q8NDF8 572 aaKnown RBP8.04□□□□□ -1.12
CHD8-213ENST00000557364 FANK1Q8TC84 345 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 SNRNP27Q8WVK2 155 aaKnown RBP8.04□□□□□ -1.12
CHD8-213ENST00000557364 S100A16Q96FQ6 103 aaKnown RBP8.04□□□□□ -1.12
CHD8-213ENST00000557364 PYURFQ96I23 114 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 METTL2AQ96IZ6 378 aaKnown RBP8.04□□□□□ -1.12
CHD8-213ENST00000557364 TEPSINQ96N21 525 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 TTYH2Q9BSA4 534 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms