RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 MS4A12Q9NXJ0 267 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 TRPS1Q9UHF7 1281 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 EMCNQ9ULC0 261 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 SNX6Q9UNH7 406 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 PLAAQ9Y263 795 aa11.74□□□□□ -0.53
SLIRP-209ENST00000557342 OR2W5A6NFC9 320 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 FOXO6A8MYZ6 492 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 FAM227AF5H4B4 570 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 G3V2L1 256 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 H3BQF6 201 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 SAP18O00422 153 aaKnown RBP11.73□□□□□ -0.53
SLIRP-209ENST00000557342 RTCAO00442 366 aaKnown RBP11.73□□□□□ -0.53
SLIRP-209ENST00000557342 PLIN3O60664 434 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 SH3BGRLO75368 114 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 SEMA3DO95025 777 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 UQCRHP07919 91 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 CASRP41180 1078 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 ATRXP46100 2492 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 NEK2P51955 445 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 BTG2P78543 158 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 BTBD16Q32M84 506 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 PAPD4Q6PIY7 484 aaKnown RBP11.73□□□□□ -0.53
SLIRP-209ENST00000557342 ISLR2Q6UXK2 745 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 ZNF793Q6ZN11 406 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 RPS27LQ71UM5 84 aaKnown RBP11.73□□□□□ -0.53
SLIRP-209ENST00000557342 ZCCHC7Q8N3Z6 543 aaKnown RBP11.73□□□□□ -0.53
SLIRP-209ENST00000557342 RNF175Q8N4F7 328 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 M1APQ8TC57 530 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 TSLPQ969D9 159 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 MTFMTQ96DP5 389 aaKnown RBP11.73□□□□□ -0.53
SLIRP-209ENST00000557342 APOPT1Q96IL0 206 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 LMF1Q96S06 567 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 PIEZO2Q9H5I5 2752 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 NMRK1Q9NWW6 199 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 AHSPQ9NZD4 102 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 PHF11Q9UIL8 331 aa11.73□□□□□ -0.53
SLIRP-209ENST00000557342 IGKV3D-11A0A0A0MRZ8 115 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 IGHV3-20A0A0C4DH32 117 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 TCRBV16S1A1N1A0A5B0 115 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 CCDC151A5D8V7 595 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 CYR61O00622 381 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 PLPP1O14494 284 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 CTNSO60931 367 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 ERLIN1O75477 346 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 OR4F21O95013 312 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 KRT6AP02538 564 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 KRT6BP04259 564 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 CPA3P15088 417 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 TSPAN8P19075 237 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 MAOAP21397 527 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 CPN2P22792 545 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 TLX1P31314 330 aaPredicted RBP11.72□□□□□ -0.53
SLIRP-209ENST00000557342 KRT6CP48668 564 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 PKNOX1P55347 436 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 DNAJB13P59910 316 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 ASPHQ12797 758 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 LCP2Q13094 533 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 SLC13A2Q13183 592 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 SLAMF1Q13291 335 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 MFAP5Q13361 173 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 LETMD1Q6P1Q0 360 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 CYP20A1Q6UW02 462 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 IGFL2Q6UWQ7 119 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 GPRIN3Q6ZVF9 776 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 CROCCP2Q86T23 111 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 NUDT13Q86X67 352 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 SCUBE1Q8IWY4 988 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 SRRM1Q8IYB3 904 aaKnown RBP11.72□□□□□ -0.53
SLIRP-209ENST00000557342 CCNYL1Q8N7R7 359 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 RBMXL3Q8N7X1 1067 aaKnown RBP11.72□□□□□ -0.53
SLIRP-209ENST00000557342 FAM47BQ8NA70 645 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 BRIX1Q8TDN6 353 aaKnown RBP11.72□□□□□ -0.53
SLIRP-209ENST00000557342 SELENOMQ8WWX9 145 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 PNPLA2Q96AD5 504 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 SMC6Q96SB8 1091 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 MAPKAP1Q9BPZ7 522 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 WDR77Q9BQA1 342 aaPredicted RBP11.72□□□□□ -0.53
SLIRP-209ENST00000557342 SLC29A3Q9BZD2 475 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 BRF2Q9HAW0 419 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 MMP25Q9NPA2 562 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 NECTIN3Q9NQS3 549 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 LYARQ9NX58 379 aaKnown RBP11.72□□□□□ -0.53
SLIRP-209ENST00000557342 KCMF1Q9P0J7 381 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 SENP1Q9P0U3 644 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 TEKT2Q9UIF3 430 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 PLLPQ9Y342 182 aa11.72□□□□□ -0.53
SLIRP-209ENST00000557342 SAGE2PA6NJ88 616 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 PPP6CO00743 305 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 ENO1P06733 434 aaKnown RBP11.71□□□□□ -0.53
SLIRP-209ENST00000557342 ITGAMP11215 1152 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 HSD3B1P14060 373 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 PLA2G2AP14555 144 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 HSD3B2P26439 372 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 HMOX2P30519 316 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 BUD31P41223 144 aaPredicted RBP11.71□□□□□ -0.53
SLIRP-209ENST00000557342 SLC26A5P58743 744 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 TAS2R50P59544 299 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 ZNF33BQ06732 778 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 BIKQ13323 160 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 SERTAD2Q14140 314 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms