RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 OGFOD2Q6N063 350 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 LETMD1Q6P1Q0 360 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 MTFR2Q6P444 385 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 ETV3LQ6ZN32 361 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 RFLNAQ6ZTI6 216 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 TMEM25Q86YD3 366 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 TUSC5Q8IXB3 177 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 ADGRG2Q8IZP9 1017 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 GPR26Q8NDV2 337 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 WFIKKN2Q8TEU8 576 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 MYLIPQ8WY64 445 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 ASB9Q96DX5 294 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 ACOX2Q99424 681 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 ZNF416Q9BWM5 594 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 PCDHAC1Q9H158 963 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 EBF3Q9H4W6 596 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 TMEM181Q9P2C4 612 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 LSM7Q9UK45 103 aaKnown RBP4.89□□□□□ -1.63
TMEM260-210ENST00000556422 PSMD13Q9UNM6 376 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 POFUT2Q9Y2G5 429 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 PCDHGA9Q9Y5G4 932 aaKnown RBP4.89□□□□□ -1.63
TMEM260-210ENST00000556422 GPR45Q9Y5Y3 372 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 TRIOO75962 3097 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 TRAV19A0A0A6YYK7 116 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 METTL21EPA6NDL7 271 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 E5RI56 91 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 I3L521 148 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 J3QW42 95 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 OR7A17O14581 309 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 NPC1O15118 1278 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 MATN4O95460 622 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 OPN1LWP04000 364 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 CDK1P06493 297 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 HGFP14210 728 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 RAB3AP20336 220 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 WNT5AP41221 380 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 EPHA5P54756 1037 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 NME5P56597 212 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 ERVPABLB-1P60509 514 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 RPS3AP61247 264 aaKnown RBP4.89□□□□□ -1.63
TMEM260-210ENST00000556422 B4GALNT1Q00973 533 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 PTSQ03393 145 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 PON3Q15166 354 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 LTB4RQ15722 352 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 ZIK1Q3SY52 487 aaPredicted RBP4.89□□□□□ -1.63
TMEM260-210ENST00000556422 TM4SF20Q53R12 229 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 TTC33Q6PID6 262 aaPredicted RBP4.89□□□□□ -1.63
TMEM260-210ENST00000556422 SUSD1Q6UWL2 747 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 CERS6Q6ZMG9 384 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 Q6ZSR9 355 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 DCXRQ7Z4W1 244 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 RAB44Q7Z6P3 723 aaPredicted RBP4.89□□□□□ -1.63
TMEM260-210ENST00000556422 GPSM1Q86YR5 675 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 STK40Q8N2I9 435 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 PQLC1Q8N2U9 271 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 USP7Q93009 1102 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 MCCC1Q96RQ3 725 aaPredicted RBP4.89□□□□□ -1.63
TMEM260-210ENST00000556422 SERPINI1Q99574 410 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 CITED1Q99966 193 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 GSDMCQ9BYG8 508 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 OR2B2Q9GZK3 357 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 C11orf49Q9H6J7 331 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 ASB8Q9H765 288 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 ELOVL2Q9NXB9 296 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 ZNF224Q9NZL3 707 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 ABCD2Q9UBJ2 740 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 DNAJB9Q9UBS3 223 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 TMPRSS11EQ9UL52 423 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 DTX4Q9Y2E6 619 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 DLGAP4Q9Y2H0 992 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 PPIL1Q9Y3C6 166 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 PCDHB1Q9Y5F3 818 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 KIF26AQ9ULI4 1882 aaPredicted RBP4.89□□□□□ -1.63
TMEM260-210ENST00000556422 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.89□□□□□ -1.63
TMEM260-210ENST00000556422 A0A1W2PRV1 198 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 ZNF839A8K0R7 811 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 MRASO14807 208 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 TAPBPO15533 448 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 FRS3O43559 492 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 SCO2O43819 266 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 RNASEH1O60930 286 aaKnown RBP4.89□□□□□ -1.63
TMEM260-210ENST00000556422 OR4F21O95013 312 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 CXCL14O95715 111 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 JUPP14923 745 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 GNSP15586 552 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 S100PP25815 95 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 MRPL19P49406 292 aaKnown RBP4.89□□□□□ -1.63
TMEM260-210ENST00000556422 HOXA1P49639 335 aaPredicted RBP4.89□□□□□ -1.63
TMEM260-210ENST00000556422 HTR6P50406 440 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 ERVK-25P63136 954 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 CREMQ03060 361 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 FOLH1Q04609 750 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 CAMK1Q14012 370 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 ZXDCQ2QGD7 858 aaPredicted RBP4.89□□□□□ -1.63
TMEM260-210ENST00000556422 BTBD16Q32M84 506 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 VPS26BQ4G0F5 336 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 GPRC6AQ5T6X5 926 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 LRRC66Q68CR7 880 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 TCEAL6Q6IPX3 200 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 C22orf39Q6P5X5 142 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms