RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 IGHG3P01860 377 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 HRGP04196 525 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 PKMP14618 531 aaKnown RBP6.36□□□□□ -1.39
ATXN3-236ENST00000556220 CMPK1P30085 196 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 BCL6P41182 706 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 KCNC1P48547 511 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 ASCL1P50553 236 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 OR4D2P58180 307 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 GPR85P60893 370 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 PPIAP62937 165 aaKnown RBP6.36□□□□□ -1.39
ATXN3-236ENST00000556220 MPP1Q00013 466 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 RHAGQ02094 409 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 RELAQ04206 551 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 ABRAXAS2Q15018 415 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 TCEAL1Q15170 157 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 HSPB2Q16082 182 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 C1orf185Q5T7R7 199 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 KAZNQ674X7 775 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 ALKBH5Q6P6C2 394 aaKnown RBP6.36□□□□□ -1.39
ATXN3-236ENST00000556220 RGS9BPQ6ZS82 235 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 MDGA2Q7Z553 956 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 RELL2Q8NC24 303 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-236ENST00000556220 OR9A4Q8NGU2 314 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 LINC01560Q8TB33 94 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 MCOLN3Q8TDD5 553 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 ASZ1Q8WWH4 475 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 PIGTQ969N2 578 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 RAD51AP1Q96B01 352 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 YIPF4Q9BSR8 244 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 ACAT2Q9BWD1 397 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 NAT10Q9H0A0 1025 aaKnown RBP6.36□□□□□ -1.39
ATXN3-236ENST00000556220 GBA3Q9H227 469 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 ARNT2Q9HBZ2 717 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 MRPS30Q9NP92 439 aaKnown RBP6.36□□□□□ -1.39
ATXN3-236ENST00000556220 UTP6Q9NYH9 597 aaKnown RBP6.36□□□□□ -1.39
ATXN3-236ENST00000556220 CTTNBP2NLQ9P2B4 639 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 FEZ2Q9UHY8 353 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-236ENST00000556220 LCMT1Q9UIC8 334 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 AAR2Q9Y312 384 aaKnown RBP6.36□□□□□ -1.39
ATXN3-236ENST00000556220 DUSP10Q9Y6W6 482 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 USF3Q68DE3 2245 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 CHD3Q12873 2000 aaKnown RBP6.35□□□□□ -1.39
ATXN3-236ENST00000556220 PINLYPA6NC86 204 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 FAM166BA8MTA8 275 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 MAGEB17A8MXT2 336 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 HACD1B0YJ81 288 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 ACOT7O00154 380 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 CLDN4O14493 209 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 AQP7O14520 342 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 P2RX6O15547 441 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 ZNF500O60304 480 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-236ENST00000556220 CST8O60676 142 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 SERPINC1P01008 464 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 GABRA1P14867 456 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 PECAM1P16284 738 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-236ENST00000556220 BMP5P22003 454 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 IL10P22301 178 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 PSMA3P25788 255 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 AOAHP28039 575 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 LIMS1P48059 325 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 PRR5P85299 388 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 PLGLB1Q02325 96 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 PRDX1Q06830 199 aaKnown RBP6.35□□□□□ -1.39
ATXN3-236ENST00000556220 TFDP2Q14188 446 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 CCSMST1Q4G0I0 132 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 ODF2Q5BJF6 829 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 LRRC38Q5VT99 294 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 ZNF425Q6IV72 752 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 MFSD7Q6UXD7 560 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 KIAA0408Q6ZU52 694 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 SEM1Q6ZVN7 128 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 TRILQ7L0X0 811 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 SLC22A16Q86VW1 577 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 KIF18BQ86Y91 864 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 CYP4Z2PQ8N1L4 340 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 STYXQ8WUJ0 223 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 TSLPQ969D9 159 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 CARD6Q9BX69 1037 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 DEFB126Q9BYW3 111 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 DEPPQ9NTK1 212 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 ABHD10Q9NUJ1 306 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 ALKBH4Q9NXW9 302 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 HCN3Q9P1Z3 774 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 MTRF1LQ9UGC7 380 aaKnown RBP6.35□□□□□ -1.39
ATXN3-236ENST00000556220 ACAD8Q9UKU7 415 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 TTC7AQ9ULT0 858 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-236ENST00000556220 CAPN11Q9UMQ6 739 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 MRFAP1Q9Y605 127 aa6.35□□□□□ -1.39
ATXN3-236ENST00000556220 BZW2Q9Y6E2 419 aaKnown RBP6.35□□□□□ -1.39
ATXN3-236ENST00000556220 A0A087X0T9 212 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 KRT87PA6NCN2 255 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 OR51F1A6NGY5 319 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 IQCF5A8MTL0 148 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 SGK494L7N484 410 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 DVL2O14641 736 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 SUSD5O60279 629 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 DNAJB6O75190 326 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 CDC123O75794 336 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-236ENST00000556220 GLSO94925 669 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-236ENST00000556220 CNOT4O95628 575 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms