RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 B8ZZF3 427 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 RGS16O15492 202 aaPredicted RBP12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 TYROBPO43914 113 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 ERLIN1O75477 346 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 SEC24DO94855 1032 aaPredicted RBP12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 PDYNP01213 254 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 SERPINA7P05543 415 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 BSGP35613 385 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 SSR2P43308 183 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 RAP1GDS1P52306 607 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 PKNOX1P55347 436 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 HSD17B7P56937 341 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 NAA20P61599 178 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 C19orf57Q0VDD7 668 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 SLAMF1Q13291 335 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 SFT2D3Q587I9 215 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 TNFAIP8L3Q5GJ75 292 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 CEP85LQ5SZL2 805 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 LRIG3Q6UXM1 1119 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 PTRH1Q86Y79 214 aaKnown RBP12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 C10orf107Q8IVU9 208 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 SCUBE1Q8IWY4 988 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 ZNF595Q8IYB9 648 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 ZCCHC7Q8N3Z6 543 aaKnown RBP12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 CDYL2Q8N8U2 506 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 CCDC63Q8NA47 563 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 METTL6Q8TCB7 284 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 TCP10LQ8TDR4 215 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 ADAMTS18Q8TE60 1221 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 PSMF1Q92530 271 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 THOC3Q96J01 351 aaKnown RBP12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 SERPINI1Q99574 410 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 CENPKQ9BS16 269 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 SLC29A3Q9BZD2 475 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 LHPPQ9H008 270 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 IQCGQ9H095 443 aaKnown RBP12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 DDX31Q9H8H2 851 aaKnown RBP12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 RRAGDQ9NQL2 400 aaPredicted RBP12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 NECTIN3Q9NQS3 549 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 RIC8BQ9NVN3 520 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 SENP1Q9P0U3 644 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 C5AR2Q9P296 337 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 SLC17A7Q9P2U7 560 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 G3BP2Q9UN86 482 aaKnown RBP12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 SNX6Q9UNH7 406 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 STK38LQ9Y2H1 464 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 MMACHCQ9Y4U1 282 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 CLDN16Q9Y5I7 305 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 SPENQ96T58 3664 aaKnown RBP12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 MED13Q9UHV7 2174 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 SCN3AQ9NY46 2000 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 HELZ2Q9BYK8 2649 aaKnown RBP12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 MANBAO00462 879 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 CLDN4O14493 209 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 KLHL41O60662 606 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 CTNSO60931 367 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 EEDO75530 441 aaKnown RBP12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 SEMA3DO95025 777 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 ESRRBO95718 433 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 CELA2AP08217 269 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 PRR35P0CG20 571 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 ICAM2P13598 275 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 OR4D2P58180 307 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 ACTN3Q08043 901 aaPredicted RBP12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 RCN2Q14257 317 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 PCLAFQ15004 111 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 TCHHL1Q5QJ38 904 aaPredicted RBP12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 VWA5B1Q5TIE3 1220 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 LIPMQ5VYY2 423 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 IGFL3Q6UXB1 125 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 FRMD7Q6ZUT3 714 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 EXOC3L1Q86VI1 746 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 FAM47BQ8NA70 645 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 AGAP11Q8TF27 550 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 SELENOMQ8WWX9 145 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 ZBTB9Q96C00 473 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 PGM2Q96G03 612 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 FAM111AQ96PZ2 611 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 CSF3RQ99062 836 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 BRF2Q9HAW0 419 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 ZBTB20Q9HC78 741 aaPredicted RBP12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 MID1IP1Q9NPA3 183 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 PRTFDC1Q9NRG1 225 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 MID2Q9UJV3 735 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 MRPS33Q9Y291 106 aaKnown RBP12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 ZNF451Q9Y4E5 1061 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 COL6A6A6NMZ7 2263 aa12.12□□□□□ -0.47
MTHFD1-208ENST00000554739 GCN1Q92616 2671 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 A0A0A6YYD5 115 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 TGFBR3LH3BV60 316 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 SUV39H1O43463 412 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 TMPRSS11DO60235 418 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 TRIM13O60858 407 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 ULK1O75385 1050 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 KRT6AP02538 564 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 KRT6BP04259 564 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 ALPPP05187 535 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 ENO1P06733 434 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 ALDH3A1P30838 453 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 KRT6CP48668 564 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms