RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 WASHC1A8K0Z3 465 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 ANHXE9PGG2 379 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 EPN2O95208 641 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 C6orf47O95873 294 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 TTKP33981 857 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 PTGER1P34995 402 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 ALDH9A1P49189 494 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 PIGFQ07326 219 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 WASH2PQ6VEQ5 465 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 CHRDL2Q6WN34 429 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 PRR23BQ6ZRT6 265 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 PGBD3Q8N328 593 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 TNIP2Q8NFZ5 429 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 OR4A15Q8NGL6 344 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 C16orf78Q8WTQ4 265 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 TMBIM1Q969X1 311 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 FKBP10Q96AY3 582 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 CAMK1GQ96NX5 476 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 HHIPQ96QV1 700 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 SH3GL1Q99961 368 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 GPN2Q9H9Y4 310 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-212ENST00000554467 DMDP11532 3685 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 SERTM1A2A2V5 107 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 EVPLLA8MZ36 301 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 HSD3B1P14060 373 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 PRKACGP22612 351 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 HSD3B2P26439 372 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 ZNF763Q0D2J5 394 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 ATP6AP1Q15904 470 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 SPATS1Q496A3 300 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 ZNF542PQ5EBM4 170 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 VTCN1Q7Z7D3 282 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 CALHM3Q86XJ0 350 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 FAM129CQ86XR2 697 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 AMER3Q8N944 861 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 OR1E3Q8WZA6 343 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 TTYH1Q9H313 450 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-212ENST00000554467 TPT1P8Q9HAU6 139 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 C2orf42Q9NWW7 574 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 SMPD3Q9NY59 655 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-212ENST00000554467 SPHK1Q9NYA1 384 aa11.16□□□□□ -0.62
SHMT2-212ENST00000554467 TDRD6O60522 2096 aaKnown RBP11.15□□□□□ -0.62
SHMT2-212ENST00000554467 ANKDD1BA6NHY2 528 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 CLDN25C9JDP6 229 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 NPIPB8E9PQR5 432 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 CACNB4O00305 520 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-212ENST00000554467 RGS13O14921 159 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 PLA2G16P53816 162 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 HBA1P69905 142 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 MPEG1Q2M385 716 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 LRIT3Q3SXY7 679 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 CCDC58Q4VC31 144 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 CYBRD1Q53TN4 286 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 COX20Q5RI15 118 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 SFTPA2Q8IWL1 248 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 FAM9CQ8IZT9 166 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 OR8J2Q8NGG1 315 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 OR52E1Q8NGJ3 308 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 ZNF486Q96H40 463 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-212ENST00000554467 CNDP2Q96KP4 475 aaKnown RBP11.15□□□□□ -0.62
SHMT2-212ENST00000554467 MUS81Q96NY9 551 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 DGCR6LQ9BY27 220 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 AASDHPPTQ9NRN7 309 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 TBC1D29Q9UFV1 150 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 SCN3AQ9NY46 2000 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 IGKV1-8A0A0C4DH67 115 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 PTGES3LE9PB15 166 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 PLPP1O14494 284 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 NOL3O60936 208 aaKnown RBP11.15□□□□□ -0.62
SHMT2-212ENST00000554467 CST1P01037 141 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 RAP2AP10114 183 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 UMPSP11172 480 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 TPMTP51580 245 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 VAC14Q08AM6 782 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 TMTC4Q5T4D3 741 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 LCTLQ6UWM7 567 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 SLC16A12Q6ZSM3 486 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 DGLUCYQ7Z3D6 616 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 WDR34Q96EX3 536 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 CCDC115Q96NT0 180 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 CENPOQ9BU64 300 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 ALOXE3Q9BYJ1 711 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 SMURF2Q9HAU4 748 aa11.15□□□□□ -0.62
SHMT2-212ENST00000554467 UPK1AO00322 258 aa11.15□□□□□ -0.63
SHMT2-212ENST00000554467 KCNK5O95279 499 aa11.15□□□□□ -0.63
SHMT2-212ENST00000554467 ACPPP15309 386 aa11.15□□□□□ -0.63
SHMT2-212ENST00000554467 IL7RP16871 459 aa11.15□□□□□ -0.63
SHMT2-212ENST00000554467 SKIV2LQ15477 1246 aaKnown RBP11.15□□□□□ -0.63
SHMT2-212ENST00000554467 KIAA1161Q6NSJ0 714 aa11.15□□□□□ -0.63
SHMT2-212ENST00000554467 ABRAXAS1Q6UWZ7 409 aa11.15□□□□□ -0.63
SHMT2-212ENST00000554467 PEX5LQ8IYB4 626 aa11.15□□□□□ -0.63
SHMT2-212ENST00000554467 SIX5Q8N196 739 aa11.15□□□□□ -0.63
SHMT2-212ENST00000554467 SMPDL3AQ92484 453 aa11.15□□□□□ -0.63
SHMT2-212ENST00000554467 TUBA1CQ9BQE3 449 aa11.15□□□□□ -0.63
SHMT2-212ENST00000554467 GORASP2Q9H8Y8 452 aa11.15□□□□□ -0.63
SHMT2-212ENST00000554467 IFT80Q9P2H3 777 aaPredicted RBP11.15□□□□□ -0.63
SHMT2-212ENST00000554467 ACSL5Q9ULC5 683 aa11.15□□□□□ -0.63
SHMT2-212ENST00000554467 FZD4Q9ULV1 537 aa11.15□□□□□ -0.63
SHMT2-212ENST00000554467 SLC17A4Q9Y2C5 497 aa11.15□□□□□ -0.63
SHMT2-212ENST00000554467 SNX11Q9Y5W9 270 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms