RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 SERPINB9P50453 376 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 ALDH18A1P54886 795 aaKnown RBP9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 MTTPP55157 894 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 BTG2P78543 158 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 IRF9Q00978 393 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 BMPR2Q13873 1038 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 RUNX2Q13950 521 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 SETDB1Q15047 1291 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 TMEM35AQ53FP2 167 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 GRHL2Q6ISB3 625 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 MED27Q6P2C8 311 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 TAOK1Q7L7X3 1001 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 CRLF3Q8IUI8 442 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 ZNF595Q8IYB9 648 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 BEST3Q8N1M1 668 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 C7orf57Q8NEG2 295 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 DNAJB8Q8NHS0 232 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 ZNF473Q8WTR7 871 aaKnown RBP9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 NR4A3Q92570 626 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 GPR78Q96P69 363 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 MS4A8Q9BY19 250 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 COPS7BQ9H9Q2 264 aaPredicted RBP9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 LYRM4Q9HD34 91 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 ZNF180Q9UJW8 692 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 PPIEQ9UNP9 301 aaKnown RBP9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 SLC5A6Q9Y289 635 aa9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 TNPO3Q9Y5L0 923 aaKnown RBP9.75□□□□□ -0.85
PTCD2P1-201ENST00000554393 WIPF3A6NGB9 483 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 FAM227AF5H4B4 570 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 UGDHO60701 494 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 RASAL1O95294 804 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 ACSL3O95573 720 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 CRYABP02511 175 aaKnown RBP9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 COL6A2P12110 1019 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 GFAPP14136 432 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 MSH2P43246 934 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 PIK3CGP48736 1102 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 TDGF1P3P51864 188 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 ARFIP1P53367 373 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 PLA2G16P53816 162 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 LIM2P55344 173 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 TUBA3CQ13748 450 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 PCBP2Q15366 365 aaKnown RBP eCLIP9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 UAP1Q16222 522 aaPredicted RBP9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 TECRLQ5HYJ1 363 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 LIPJQ5W064 366 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 ADNP2Q6IQ32 1131 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 TUBA3EQ6PEY2 450 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 CHSY3Q70JA7 882 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 CNPY4Q8N129 248 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 HORMAD2Q8N7B1 307 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 CEP112Q8N8E3 955 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 MDS2Q8NDY4 140 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 NFAM1Q8NET5 270 aaPredicted RBP9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 B3GNT7Q8NFL0 401 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 OR7G3Q8NG95 312 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 IFT81Q8WYA0 676 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 MRRFQ96E11 262 aaKnown RBP9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 CMTM7Q96FZ5 175 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 MAGEB10Q96LZ2 347 aaPredicted RBP9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 TAAR6Q96RI8 345 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 PAFAH2Q99487 392 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 NPAS2Q99743 824 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 UTP23Q9BRU9 249 aaKnown RBP9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 TBCDQ9BTW9 1192 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 NECTIN3Q9NQS3 549 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 PRDM7Q9NQW5 492 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 PRTFDC1Q9NRG1 225 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 TMCO1Q9UM00 188 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 DAPP1Q9UN19 280 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 IKBKGQ9Y6K9 419 aa9.74□□□□□ -0.85
PTCD2P1-201ENST00000554393 A0A087WUV0 522 aaPredicted RBP9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 A0A0G2JN53 185 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 GABRR3A8MPY1 467 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 CYR61O00622 381 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 CTNSO60931 367 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 F10P00742 488 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 LDLRP01130 860 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 ABHD2P08910 425 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 RBP1P09455 135 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 CERS1P27544 350 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 PIK3CBP42338 1070 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 SLC13A2Q13183 592 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 PFKFB4Q16877 469 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 TSNAXIP1Q2TAA8 658 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 ZNF766Q5HY98 468 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 UBAP2Q5T6F2 1119 aaKnown RBP9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 KHDRBS2Q5VWX1 349 aaKnown RBP9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 FCRLBQ6BAA4 426 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 RPS19BP1Q86WX3 136 aaKnown RBP9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 CYP4X1Q8N118 509 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 TEX9Q8N6V9 391 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 AMER2Q8N7J2 671 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 ACOT4Q8N9L9 421 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 TMEM178AQ8NBL3 297 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 APCDD1LQ8NCL9 501 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 REPS1Q96D71 796 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 SCMH1Q96GD3 660 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 C5orf34Q96MH7 638 aa9.73□□□□□ -0.85
PTCD2P1-201ENST00000554393 F2RL3Q96RI0 385 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms