RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 AGXTP21549 392 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 GPX3P22352 226 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 CPN2P22792 545 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 TAS2R50P59544 299 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 SRSF11Q05519 484 aaKnown RBP13.73□□□□□ -0.21
SHMT2-210ENST00000553950 RCAN2Q14206 197 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 PTGR1Q14914 329 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 ARHGAP40Q5TG30 622 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 OR52E8Q6IFG1 317 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 CAMKMTQ7Z624 323 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 OR9A4Q8NGU2 314 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 OR1F2PQ96R84 312 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 SLC25A23Q9BV35 468 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 SORBS1Q9BX66 1292 aaKnown RBP13.73□□□□□ -0.21
SHMT2-210ENST00000553950 CLMPQ9H6B4 373 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 REEP4Q9H6H4 257 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 ZNF304Q9HCX3 659 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 GIMAP4Q9NUV9 329 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 C14orf105Q9NVL8 296 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 PISDQ9UG56 409 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 RAPGEFL1Q9UHV5 662 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 PSME2Q9UL46 239 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 G3BP2Q9UN86 482 aaKnown RBP13.73□□□□□ -0.21
SHMT2-210ENST00000553950 MAP4K5Q9Y4K4 846 aa13.73□□□□□ -0.21
SHMT2-210ENST00000553950 CNOT1A5YKK6 2376 aaKnown RBP13.73□□□□□ -0.21
SHMT2-210ENST00000553950 FOXS1O43638 330 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 GBAP04062 536 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 KLK3P07288 261 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-210ENST00000553950 CYC1P08574 325 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 IL3P08700 152 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 CD63P08962 238 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 COX7A2P14406 83 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 TACR1P25103 407 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 CD82P27701 267 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 PIK3R1P27986 724 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 MNAT1P51948 309 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 POLR2JP52435 117 aaKnown RBP13.72□□□□□ -0.21
SHMT2-210ENST00000553950 LIM2P55344 173 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 ABHD18Q0P651 414 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 KLF10Q13118 480 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 UBAP2LQ14157 1087 aaKnown RBP13.72□□□□□ -0.21
SHMT2-210ENST00000553950 KRT72Q14CN4 511 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 AGKQ53H12 422 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 NDUFAF5Q5TEU4 345 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 FAM71E1Q6IPT2 247 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 PWWP2BQ6NUJ5 590 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 PDSS2Q86YH6 399 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 VPS37AQ8NEZ2 397 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.72□□□□□ -0.21
SHMT2-210ENST00000553950 FKBP10Q96AY3 582 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 PPCDCQ96CD2 204 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 CCDC106Q9BWC9 280 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 ULBP3Q9BZM4 244 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 MKKSQ9NPJ1 570 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-210ENST00000553950 FAM120CQ9NX05 1096 aaKnown RBP13.72□□□□□ -0.21
SHMT2-210ENST00000553950 ENTPD4Q9Y227 616 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 MRPS2Q9Y399 296 aaKnown RBP13.72□□□□□ -0.21
SHMT2-210ENST00000553950 ASB4Q9Y574 426 aa13.72□□□□□ -0.21
SHMT2-210ENST00000553950 KNTC1P50748 2209 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 C9J4A7 227 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 SGK494L7N484 410 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 CLDN4O14493 209 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 ANKRD28O15084 1053 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 CFLARO15519 480 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 HYAL3O43820 417 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-210ENST00000553950 HNRNPCL1O60812 293 aaKnown RBP13.71□□□□□ -0.21
SHMT2-210ENST00000553950 AIFM1O95831 613 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 CTSBP07858 339 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 FURINP09958 794 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 CCL4P13236 92 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 ALAS2P22557 587 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 NTSP30990 170 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 KIR3DL1P43629 444 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 MAPK10P53779 464 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 HNRNPH2P55795 449 aaKnown RBP13.71□□□□□ -0.21
SHMT2-210ENST00000553950 DCDP81605 110 aaKnown RBP13.71□□□□□ -0.21
SHMT2-210ENST00000553950 ACTN3Q08043 901 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-210ENST00000553950 C2orf80Q0P641 193 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 STX5Q13190 355 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 PDE7AQ13946 482 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 MAP7Q14244 749 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 COQ5Q5HYK3 327 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 C3orf38Q5JPI3 329 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 ANXA8L1Q5VT79 327 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 IGF2-ASQ6U949 168 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 TMPRSS7Q7RTY8 843 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 PRSS41Q7RTY9 318 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 ZNF595Q8IYB9 648 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 DSELQ8IZU8 1212 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 CA13Q8N1Q1 262 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 DNAJB8Q8NHS0 232 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 CLHC1Q8NHS4 586 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 ZFP28Q8NHY6 868 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 RP9Q8TA86 221 aaKnown RBP13.71□□□□□ -0.21
SHMT2-210ENST00000553950 TM4SF18Q96CE8 201 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 FAM122AQ96E09 287 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 GBP5Q96PP8 586 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 FAM117AQ9C073 453 aa13.71□□□□□ -0.21
SHMT2-210ENST00000553950 BHLHE41Q9C0J9 482 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-210ENST00000553950 RMND5AQ9H871 391 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms