RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 RELAQ04206 551 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 MAN2A1Q16706 1144 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.77□□□□□ -1.65
CKAP4-203ENST00000553039 P3H1Q32P28 736 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 C6orf52Q5T4I8 152 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 MBNL2Q5VZF2 373 aaKnown RBP4.77□□□□□ -1.65
CKAP4-203ENST00000553039 LANCL3Q6ZV70 420 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 MDGA2Q7Z553 956 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 PM20D2Q8IYS1 436 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 ARMC10Q8N2F6 343 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 C2orf73Q8N5S3 287 aaPredicted RBP4.77□□□□□ -1.65
CKAP4-203ENST00000553039 CSNK1A1LQ8N752 337 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 ZNF441Q8N8Z8 693 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 PSD4Q8NDX1 1056 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 TNIP2Q8NFZ5 429 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 OR2M7Q8NG81 312 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 GIMAP7Q8NHV1 300 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 FAM71BQ8TC56 605 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 BLOC1S5Q8TDH9 187 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 ZFAND2BQ8WV99 257 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 CCT6BQ92526 530 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 FAM46AQ96IP4 442 aaKnown RBP4.77□□□□□ -1.65
CKAP4-203ENST00000553039 LCORQ96JN0 433 aaPredicted RBP4.77□□□□□ -1.65
CKAP4-203ENST00000553039 ART5Q96L15 291 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 C10orf90Q96M02 699 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 TIGD1Q96MW7 591 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 PEBP4Q96S96 227 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 KCNJ15Q99712 375 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 CEP41Q9BYV8 373 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 TTTY12Q9BZ98 90 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 PIGMQ9H3S5 423 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 CALHM2Q9HA72 323 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 MRPL47Q9HD33 250 aaKnown RBP4.77□□□□□ -1.65
CKAP4-203ENST00000553039 HPF1Q9NWY4 346 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 C6orf203Q9P0P8 240 aaPredicted RBP4.77□□□□□ -1.65
CKAP4-203ENST00000553039 ARMCX1Q9P291 453 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 FAM153AQ9UHL3 310 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 CTNND2Q9UQB3 1225 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 GPR52Q9Y2T5 361 aa4.77□□□□□ -1.65
CKAP4-203ENST00000553039 PHF3Q92576 2039 aaKnown RBP4.77□□□□□ -1.65
CKAP4-203ENST00000553039 FEZF1A0PJY2 475 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 SYCE3A1L190 88 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 AGAP14A8MT82 685 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 MAGEB17A8MXT2 336 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 KCNK1O00180 336 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 UBFD1O14562 309 aaKnown RBP4.76□□□□□ -1.65
CKAP4-203ENST00000553039 SLC16A5O15375 505 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 FOXS1O43638 330 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 SGTAO43765 313 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 GLSO94925 669 aaPredicted RBP4.76□□□□□ -1.65
CKAP4-203ENST00000553039 FTH1P02794 183 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 P04436 131 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 OSMP13725 252 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 KRT15P19012 456 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 CMPK1P30085 196 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 PEBP1P30086 187 aaKnown RBP4.76□□□□□ -1.65
CKAP4-203ENST00000553039 PKLRP30613 574 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 PIK3CBP42338 1070 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 MAGEA5P43359 124 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 XCR1P46094 333 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 SSR4P51571 173 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 CLCN2P51788 898 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 ZNF136P52737 540 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 SLC16A1P53985 500 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 DSCR9P59020 149 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 IFI35P80217 286 aaPredicted RBP4.76□□□□□ -1.65
CKAP4-203ENST00000553039 TBL3Q12788 808 aaKnown RBP4.76□□□□□ -1.65
CKAP4-203ENST00000553039 CDK5R2Q13319 367 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 GAB1Q13480 694 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 PIGHQ14442 188 aaPredicted RBP4.76□□□□□ -1.65
CKAP4-203ENST00000553039 ABRAXAS2Q15018 415 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 HADHQ16836 314 aaKnown RBP4.76□□□□□ -1.65
CKAP4-203ENST00000553039 SYT16Q17RD7 645 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 FAM174BQ3ZCQ3 159 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 PRR31Q5SQ13 230 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 NSUN5P2Q63ZY6 315 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 DPY19L2P1Q6NXN4 242 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 SCIMPQ6UWF3 145 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 RNF111Q6ZNA4 994 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 SH2D5Q6ZV89 423 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 SEM1Q6ZVN7 128 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 SYDE1Q6ZW31 735 aaPredicted RBP4.76□□□□□ -1.65
CKAP4-203ENST00000553039 TAS2R42Q7RTR8 314 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 SNX20Q7Z614 316 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 TSPYL5Q86VY4 417 aaPredicted RBP4.76□□□□□ -1.65
CKAP4-203ENST00000553039 CPNE8Q86YQ8 564 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 SHISA5Q8N114 240 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 SLC25A41Q8N5S1 370 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 TMEM251Q8N6I4 163 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 AMER2Q8N7J2 671 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 KCTD6Q8NC69 237 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 UHMK1Q8TAS1 419 aaKnown RBP4.76□□□□□ -1.65
CKAP4-203ENST00000553039 SLC22A8Q8TCC7 542 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 MAGEC3Q8TD91 643 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 LRTOMTQ8WZ04 291 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 ELMO1Q92556 727 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 SYN2Q92777 582 aaPredicted RBP4.76□□□□□ -1.65
CKAP4-203ENST00000553039 UCN3Q969E3 161 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 KIAA1191Q96A73 305 aa4.76□□□□□ -1.65
CKAP4-203ENST00000553039 RAD51AP1Q96B01 352 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms