RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 ABRAXAS1Q6UWZ7 409 aa4.69□□□□□ -1.66
SCAF11-214ENST00000550893 RAB11FIP2Q7L804 512 aa4.69□□□□□ -1.66
SCAF11-214ENST00000550893 ZFAND4Q86XD8 727 aa4.69□□□□□ -1.66
SCAF11-214ENST00000550893 SLC13A5Q86YT5 568 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-214ENST00000550893 GALNT13Q8IUC8 556 aa4.69□□□□□ -1.66
SCAF11-214ENST00000550893 RASGRP3Q8IV61 690 aa4.69□□□□□ -1.66
SCAF11-214ENST00000550893 PRELID2Q8N945 189 aa4.69□□□□□ -1.66
SCAF11-214ENST00000550893 LMNTD1Q8N9Z9 388 aa4.69□□□□□ -1.66
SCAF11-214ENST00000550893 OR4K2Q8NGD2 314 aa4.69□□□□□ -1.66
SCAF11-214ENST00000550893 WDR36Q8NI36 951 aaKnown RBP4.69□□□□□ -1.66
SCAF11-214ENST00000550893 AKAP1Q92667 903 aaKnown RBP eCLIP4.69□□□□□ -1.66
SCAF11-214ENST00000550893 P3H4Q92791 437 aa4.69□□□□□ -1.66
SCAF11-214ENST00000550893 GRAMD1AQ96CP6 724 aa4.69□□□□□ -1.66
SCAF11-214ENST00000550893 RBM41Q96IZ5 413 aaKnown RBP4.69□□□□□ -1.66
SCAF11-214ENST00000550893 ZNF578Q96N58 590 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-214ENST00000550893 GFM1Q96RP9 751 aaKnown RBP4.69□□□□□ -1.66
SCAF11-214ENST00000550893 WACQ9BTA9 647 aa4.69□□□□□ -1.66
SCAF11-214ENST00000550893 TMEM121Q9BTD3 319 aa4.69□□□□□ -1.66
SCAF11-214ENST00000550893 ZSCAN5AQ9BUG6 496 aa4.69□□□□□ -1.66
SCAF11-214ENST00000550893 GATA5Q9BWX5 397 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-214ENST00000550893 GSDMCQ9BYG8 508 aa4.69□□□□□ -1.66
SCAF11-214ENST00000550893 OR52A5Q9H2C5 316 aa4.69□□□□□ -1.66
SCAF11-214ENST00000550893 EPB41L5Q9HCM4 733 aa4.69□□□□□ -1.66
SCAF11-214ENST00000550893 SLC40A1Q9NP59 571 aa4.69□□□□□ -1.66
SCAF11-214ENST00000550893 ZNHIT6Q9NWK9 470 aaKnown RBP4.69□□□□□ -1.66
SCAF11-214ENST00000550893 PKD2L2Q9NZM6 624 aa4.69□□□□□ -1.66
SCAF11-214ENST00000550893 KLHL8Q9P2G9 620 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-214ENST00000550893 CENPEQ02224 2701 aa4.69□□□□□ -1.66
SCAF11-214ENST00000550893 CELSR2Q9HCU4 2923 aa4.69□□□□□ -1.66
SCAF11-214ENST00000550893 DOPEY2Q9Y3R5 2298 aa4.69□□□□□ -1.66
SCAF11-214ENST00000550893 LRBAP50851 2863 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 UNC79Q9P2D8 2635 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 SLC22A23A1A5C7 686 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 OR2AG2A6NM03 316 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 NVLO15381 856 aaKnown RBP4.68□□□□□ -1.66
SCAF11-214ENST00000550893 DUX1O43812 170 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 CPNE6O95741 557 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 CAPN1P07384 714 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 ANKRD34CP0C6C1 535 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 CTSEP14091 401 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 DESP17661 470 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 EGR1P18146 543 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 XRCC1P18887 633 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-214ENST00000550893 ITGAXP20702 1163 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 PDHA2P29803 388 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 RPL22P35268 128 aaKnown RBP4.68□□□□□ -1.66
SCAF11-214ENST00000550893 SPAM1P38567 509 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 MAGEA3P43357 314 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 MAGEA6P43360 314 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 CAPZBP47756 277 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 PRLHRP49683 370 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 DUSP3P51452 185 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-214ENST00000550893 RWDD2BP57060 319 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 LINC00205P59089 165 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 TMEM115Q12893 351 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-214ENST00000550893 ILF3Q12906 894 aaKnown RBP eCLIP4.68□□□□□ -1.66
SCAF11-214ENST00000550893 NFATC2Q13469 925 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 TAF1AQ15573 450 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-214ENST00000550893 BCL7AQ4VC05 210 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 CCDC38Q502W7 563 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 CAPRIN2Q6IMN6 1127 aaKnown RBP4.68□□□□□ -1.66
SCAF11-214ENST00000550893 CCDC144NLQ6NUI1 221 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 FBXO38Q6PIJ6 1188 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 WASH2PQ6VEQ5 465 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 TMEM26Q6ZUK4 368 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 GLT6D1Q7Z4J2 308 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 CCDC50Q8IVM0 306 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 CDKL3Q8IVW4 592 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-214ENST00000550893 LRRC8AQ8IWT6 810 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 BBS5Q8N3I7 341 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 TXLNBQ8N3L3 684 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 RASGEF1CQ8N431 466 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 ZNF843Q8N446 348 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 CLDN19Q8N6F1 224 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 SLC38A9Q8NBW4 561 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 OR4D9Q8NGE8 314 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 KIAA1524Q8TCG1 905 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 BLOC1S5Q8TDH9 187 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-214ENST00000550893 C1orf54Q8WWF1 131 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 LINC00615Q96LM1 132 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-214ENST00000550893 ZNF830Q96NB3 372 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-214ENST00000550893 VAT1Q99536 393 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 TBL1YQ9BQ87 522 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 SPATA16Q9BXB7 569 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 ABCG4Q9H172 646 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 DPEP2Q9H4A9 486 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 FAM96AQ9H5X1 160 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 RMI1Q9H9A7 625 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 UCK1Q9HA47 277 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 WASH6PQ9NQA3 447 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 TREX1Q9NSU2 369 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 NLE1Q9NVX2 485 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-214ENST00000550893 NCKIPSDQ9NZQ3 722 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 PISDQ9UG56 409 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 RSPH14Q9UHP6 348 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 PILRAQ9UKJ1 303 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 HS3ST3B1Q9Y662 390 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 ITPR2Q14571 2701 aa4.68□□□□□ -1.66
SCAF11-214ENST00000550893 CSMD2Q7Z408 3487 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms