RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 ZNF404Q494X3 552 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 ZNF648Q5T619 568 aaPredicted RBP22.22■■□□□ 1.15
FOXA1-202ENST00000545425 AGAP7PQ5VUJ5 663 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 PARS2Q7L3T8 475 aaKnown RBP22.22■■□□□ 1.15
FOXA1-202ENST00000545425 MCFD2Q8NI22 146 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 MAL2Q969L2 176 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 QRFPRQ96P65 431 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 KCNC2Q96PR1 638 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 NEURL2Q9BR09 285 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 NXF2Q9GZY0 626 aaKnown RBP22.22■■□□□ 1.15
FOXA1-202ENST00000545425 DCSTAMPQ9H295 470 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 SP140LQ9H930 580 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 TRIM39Q9HCM9 518 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 IMPAD1Q9NX62 359 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 CLDND1Q9NY35 253 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 PAIP2BQ9ULR5 123 aaKnown RBP22.22■■□□□ 1.15
FOXA1-202ENST00000545425 KLK4Q9Y5K2 254 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 MTCL1Q9Y4B5 1905 aaKnown RBP22.22■■□□□ 1.15
FOXA1-202ENST00000545425 PDE9AO76083 593 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 CCNB2O95067 398 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 HNRNPA1P09651 372 aaKnown RBP eCLIP22.22■■□□□ 1.15
FOXA1-202ENST00000545425 FSHRP23945 695 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 PSMD7P51665 324 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 ERVFC1P60507 584 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 NCS1P62166 190 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 TAP2Q03519 686 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 KRR1Q13601 381 aaKnown RBP22.22■■□□□ 1.15
FOXA1-202ENST00000545425 IRF3Q14653 427 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 ARHGAP19Q14CB8 494 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 ANGPTL8Q6UXH0 198 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 NFKBIDQ8NI38 313 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 PSMA8Q8TAA3 256 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 GGHQ92820 318 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 BTBD2Q9BX70 525 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 NLNQ9BYT8 704 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 PELI2Q9HAT8 420 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 SPATA7Q9P0W8 599 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 PMF1-BGLAPU3KQ54 211 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 TGM1P22735 817 aa22.21■■□□□ 1.15
FOXA1-202ENST00000545425 KELP23276 732 aa22.21■■□□□ 1.15
FOXA1-202ENST00000545425 PDHA2P29803 388 aa22.21■■□□□ 1.15
FOXA1-202ENST00000545425 CDH12P55289 794 aa22.21■■□□□ 1.15
FOXA1-202ENST00000545425 CDC20Q12834 499 aa22.21■■□□□ 1.15
FOXA1-202ENST00000545425 ZNF181Q2M3W8 571 aa22.21■■□□□ 1.15
FOXA1-202ENST00000545425 PLEKHG7Q6ZR37 379 aa22.21■■□□□ 1.15
FOXA1-202ENST00000545425 SLC44A2Q8IWA5 706 aaPredicted RBP22.21■■□□□ 1.15
FOXA1-202ENST00000545425 CFAP206Q8IYR0 622 aa22.21■■□□□ 1.15
FOXA1-202ENST00000545425 STX19Q8N4C7 294 aa22.21■■□□□ 1.15
FOXA1-202ENST00000545425 CYB5D2Q8WUJ1 264 aa22.21■■□□□ 1.15
FOXA1-202ENST00000545425 RAD51AP1Q96B01 352 aa22.21■■□□□ 1.15
FOXA1-202ENST00000545425 CDCA3Q99618 268 aaPredicted RBP22.21■■□□□ 1.15
FOXA1-202ENST00000545425 TCF25Q9BQ70 676 aa22.21■■□□□ 1.15
FOXA1-202ENST00000545425 CDCA4Q9BXL8 241 aa22.21■■□□□ 1.15
FOXA1-202ENST00000545425 IGFLR1Q9H665 355 aa22.21■■□□□ 1.15
FOXA1-202ENST00000545425 CPNE5Q9HCH3 593 aa22.21■■□□□ 1.15
FOXA1-202ENST00000545425 REV3LO60673 3130 aa22.21■■□□□ 1.15
FOXA1-202ENST00000545425 VCANP13611 3396 aa22.21■■□□□ 1.15
FOXA1-202ENST00000545425 HOXC11O43248 304 aaPredicted RBP22.2■■□□□ 1.14
FOXA1-202ENST00000545425 CNOT3O75175 753 aaKnown RBP22.2■■□□□ 1.14
FOXA1-202ENST00000545425 OXSR1O95747 527 aaPredicted RBP22.2■■□□□ 1.14
FOXA1-202ENST00000545425 RPN2P04844 631 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 IFNW1P05000 195 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 LCKP06239 509 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 RHOP08100 348 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 POU2F2P09086 479 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 PIPP12273 146 aaPredicted RBP22.2■■□□□ 1.14
FOXA1-202ENST00000545425 AQP1P29972 269 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 DGKGP49619 791 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 ZNF45Q02386 682 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 EXOC3L2Q2M3D2 409 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 PAGE2Q7Z2X7 111 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 OR2L2Q8NH16 312 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 RASSF5Q8WWW0 418 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 OR5P2Q8WZ92 322 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 NUS1Q96E22 293 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 PCBD2Q9H0N5 130 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 RHBGQ9H310 441 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 NT5DC2Q9H857 520 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 A4GALTQ9NPC4 353 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 FAM8A1Q9UBU6 413 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 KCND3Q9UK17 655 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 TTC28Q96AY4 2481 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 XIRP2A4UGR9 3374 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 METTL15A6NJ78 407 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 CISD3P0C7P0 127 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 CBLP22681 906 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 DSTNP60981 165 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 CBX3Q13185 183 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 ADAM15Q13444 863 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 SF1Q15637 639 aaKnown RBP22.2■■□□□ 1.14
FOXA1-202ENST00000545425 COX20Q5RI15 118 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 CATSPEREQ5SY80 951 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 REEP3Q6NUK4 255 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 OR4K1Q8NGD4 311 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 ZNF675Q8TD23 568 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 TCEAL4Q96EI5 215 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 PDXPQ96GD0 296 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 LINC00597Q9H2U6 94 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 NEUROD4Q9HD90 331 aa22.2■■□□□ 1.14
FOXA1-202ENST00000545425 ACER3Q9NUN7 267 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms