RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 SMIM10L1P0DMW3 83 aa18.83■□□□□ 0.6
COPS7A-218ENST00000543939 BMP2P12643 396 aa18.83■□□□□ 0.6
COPS7A-218ENST00000543939 FNTBP49356 437 aa18.83■□□□□ 0.6
COPS7A-218ENST00000543939 MVDP53602 400 aa18.83■□□□□ 0.6
COPS7A-218ENST00000543939 PCBP4P57723 403 aaKnown RBP18.83■□□□□ 0.6
COPS7A-218ENST00000543939 SIM2Q14190 667 aaPredicted RBP18.83■□□□□ 0.6
COPS7A-218ENST00000543939 ADRM1Q16186 407 aa18.83■□□□□ 0.6
COPS7A-218ENST00000543939 VMACQ2NL98 169 aa18.83■□□□□ 0.6
COPS7A-218ENST00000543939 ARMC6Q6NXE6 501 aa18.83■□□□□ 0.6
COPS7A-218ENST00000543939 RNF44Q7L0R7 432 aa18.83■□□□□ 0.6
COPS7A-218ENST00000543939 ZNF438Q7Z4V0 828 aa18.83■□□□□ 0.6
COPS7A-218ENST00000543939 NETO1Q8TDF5 533 aa18.83■□□□□ 0.6
COPS7A-218ENST00000543939 UTP15Q8TED0 518 aaKnown RBP18.83■□□□□ 0.6
COPS7A-218ENST00000543939 OR5P2Q8WZ92 322 aa18.83■□□□□ 0.6
COPS7A-218ENST00000543939 UCN3Q969E3 161 aa18.83■□□□□ 0.6
COPS7A-218ENST00000543939 SMIM10Q96HG1 83 aa18.83■□□□□ 0.6
COPS7A-218ENST00000543939 DCAF13Q9NV06 445 aaKnown RBP18.83■□□□□ 0.6
COPS7A-218ENST00000543939 C5AR2Q9P296 337 aa18.83■□□□□ 0.6
COPS7A-218ENST00000543939 V9GYQ6 96 aa18.83■□□□□ 0.6
COPS7A-218ENST00000543939 SCN3AQ9NY46 2000 aa18.82■□□□□ 0.6
COPS7A-218ENST00000543939 PRAMEF10O60809 474 aa18.82■□□□□ 0.6
COPS7A-218ENST00000543939 GUCY1B2O75343 617 aa18.82■□□□□ 0.6
COPS7A-218ENST00000543939 PIAS2O75928 621 aa18.82■□□□□ 0.6
COPS7A-218ENST00000543939 NTRK1P04629 796 aa18.82■□□□□ 0.6
COPS7A-218ENST00000543939 FCGR1AP12314 374 aa18.82■□□□□ 0.6
COPS7A-218ENST00000543939 FASP25445 335 aa18.82■□□□□ 0.6
COPS7A-218ENST00000543939 CERS1P27544 350 aa18.82■□□□□ 0.6
COPS7A-218ENST00000543939 AQP4P55087 323 aa18.82■□□□□ 0.6
COPS7A-218ENST00000543939 FAM180BQ6P0A1 224 aa18.82■□□□□ 0.6
COPS7A-218ENST00000543939 OGFOD3Q6PK18 319 aa18.82■□□□□ 0.6
COPS7A-218ENST00000543939 ANKFN1Q8N957 763 aa18.82■□□□□ 0.6
COPS7A-218ENST00000543939 NCLNQ969V3 563 aa18.82■□□□□ 0.6
COPS7A-218ENST00000543939 EXOSC8Q96B26 276 aaKnown RBP18.82■□□□□ 0.6
COPS7A-218ENST00000543939 SEPHS2Q99611 448 aa18.82■□□□□ 0.6
COPS7A-218ENST00000543939 OLAHQ9NV23 265 aa18.82■□□□□ 0.6
COPS7A-218ENST00000543939 GPATCH2Q9NW75 528 aa18.82■□□□□ 0.6
COPS7A-218ENST00000543939 ATG4BQ9Y4P1 393 aa18.82■□□□□ 0.6
COPS7A-218ENST00000543939 LOC105369274A0A096LPK9 316 aa18.81■□□□□ 0.6
COPS7A-218ENST00000543939 LOC102723532A0A0G2JNH3 316 aa18.81■□□□□ 0.6
COPS7A-218ENST00000543939 A0A1W2PR48 441 aa18.81■□□□□ 0.6
COPS7A-218ENST00000543939 LILRA5A6NI73 299 aa18.81■□□□□ 0.6
COPS7A-218ENST00000543939 TPST1O60507 370 aa18.81■□□□□ 0.6
COPS7A-218ENST00000543939 ZNF888P0CJ79 500 aaPredicted RBP18.81■□□□□ 0.6
COPS7A-218ENST00000543939 TDGF1P13385 188 aa18.81■□□□□ 0.6
COPS7A-218ENST00000543939 BTN3A2P78410 334 aa18.81■□□□□ 0.6
COPS7A-218ENST00000543939 SIGLEC14Q08ET2 396 aa18.81■□□□□ 0.6
COPS7A-218ENST00000543939 DEFB133Q30KQ1 61 aa18.81■□□□□ 0.6
COPS7A-218ENST00000543939 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.81■□□□□ 0.6
COPS7A-218ENST00000543939 SWT1Q5T5J6 900 aaKnown RBP18.81■□□□□ 0.6
COPS7A-218ENST00000543939 FRMPD2BQ6IN97 320 aa18.81■□□□□ 0.6
COPS7A-218ENST00000543939 DGLUCYQ7Z3D6 616 aa18.81■□□□□ 0.6
COPS7A-218ENST00000543939 OR4N4Q8N0Y3 316 aa18.81■□□□□ 0.6
COPS7A-218ENST00000543939 CAMKVQ8NCB2 501 aa18.81■□□□□ 0.6
COPS7A-218ENST00000543939 OR52N2Q8NGI0 321 aa18.81■□□□□ 0.6
COPS7A-218ENST00000543939 DPH2Q9BQC3 489 aaPredicted RBP18.81■□□□□ 0.6
COPS7A-218ENST00000543939 UGT2B28Q9BY64 529 aa18.81■□□□□ 0.6
COPS7A-218ENST00000543939 SEMA6CQ9H3T2 930 aa18.81■□□□□ 0.6
COPS7A-218ENST00000543939 PRMT8Q9NR22 394 aaPredicted RBP18.81■□□□□ 0.6
COPS7A-218ENST00000543939 ACSS1Q9NUB1 689 aaPredicted RBP18.81■□□□□ 0.6
COPS7A-218ENST00000543939 TNRC6BQ9UPQ9 1833 aaKnown RBP18.81■□□□□ 0.6
COPS7A-218ENST00000543939 H0YGG7 62 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 SDC3O75056 442 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 UBXN7O94888 489 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 UQCRC2P22695 453 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 ARF3P61204 181 aaPredicted RBP18.8■□□□□ 0.6
COPS7A-218ENST00000543939 SNRPNP63162 240 aaKnown RBP18.8■□□□□ 0.6
COPS7A-218ENST00000543939 C16orf72Q14CZ0 275 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 FAM98BQ52LJ0 330 aaKnown RBP18.8■□□□□ 0.6
COPS7A-218ENST00000543939 TLDC1Q6P9B6 456 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 KLHL35Q6PF15 583 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 ENPP6Q6UWR7 440 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 WDR5BQ86VZ2 330 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 FAM86B1Q8N7N1 296 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 FBXO30Q8TB52 745 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 POP5Q969H6 163 aaKnown RBP18.8■□□□□ 0.6
COPS7A-218ENST00000543939 RNF145Q96MT1 663 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 CHID1Q9BWS9 393 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.8■□□□□ 0.6
COPS7A-218ENST00000543939 EPS8L2Q9H6S3 715 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 CXorf36Q9H7Y0 433 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 UCKL1Q9NWZ5 548 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 LYARQ9NX58 379 aaKnown RBP18.8■□□□□ 0.6
COPS7A-218ENST00000543939 ACSL6Q9UKU0 697 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 CNOT11Q9UKZ1 510 aaKnown RBP18.8■□□□□ 0.6
COPS7A-218ENST00000543939 LRCH1Q9Y2L9 728 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 SH3BP5O60239 455 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 AIFM1O95831 613 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 RPSAP08865 295 aaKnown RBP18.8■□□□□ 0.6
COPS7A-218ENST00000543939 NUDT7P0C024 238 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 RAP2AP10114 183 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 IL1RNP18510 177 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 MANFP55145 182 aaKnown RBP18.8■□□□□ 0.6
COPS7A-218ENST00000543939 CHRNB3Q05901 458 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 VEZF1Q14119 521 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 MLC1Q15049 377 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 COX20Q5RI15 118 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 EME1Q96AY2 570 aa18.8■□□□□ 0.6
COPS7A-218ENST00000543939 ZBED6CLQ96FA7 236 aaPredicted RBP18.8■□□□□ 0.6
COPS7A-218ENST00000543939 CENPNQ96H22 339 aaPredicted RBP18.8■□□□□ 0.6
COPS7A-218ENST00000543939 ROGDIQ9GZN7 287 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms