RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 ANKRD28O15084 1053 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 VPS26AO75436 327 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 PLATP00750 562 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 ENPP1P22413 925 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 CPN2P22792 545 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 TBX4P57082 545 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 HSF2Q03933 536 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 RGS1Q08116 209 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 GNA13Q14344 377 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 FAM219BQ5XKK7 198 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 C8orf82Q6P1X6 216 aaPredicted RBP8.35□□□□□ -1.07
DDB1-217ENST00000540166 ZNF621Q6ZSS3 439 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 GPRIN1Q7Z2K8 1008 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 LRRTM3Q86VH5 581 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 DEFB119Q8N690 84 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 ZBTB44Q8NCP5 570 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 KCTD13Q8WZ19 329 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 L3HYPDHQ96EM0 354 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 SEMA3CQ99985 751 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 POLR2J2Q9GZM3 115 aaKnown RBP8.35□□□□□ -1.07
DDB1-217ENST00000540166 GORASP2Q9H8Y8 452 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 C3orf14Q9HBI5 128 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 THUMPD1Q9NXG2 353 aaKnown RBP8.35□□□□□ -1.07
DDB1-217ENST00000540166 TNFRSF10DQ9UBN6 386 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 ERVW-1Q9UQF0 538 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 KCTD3Q9Y597 815 aa8.35□□□□□ -1.07
DDB1-217ENST00000540166 KNTC1P50748 2209 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 LTBP2Q14767 1821 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 SCN1AP35498 2009 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 TCRBV21S2A2A0A5A6 115 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 SMIM30A4D0T7 59 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 WASHC1A8K0Z3 465 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 FFAR3O14843 346 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 CASKO14936 926 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 GPR42O15529 346 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 CPSF4O95639 269 aaKnown RBP8.34□□□□□ -1.07
DDB1-217ENST00000540166 SP9P0CG40 484 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 DCDC1P59894 354 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 ZNF367Q7RTV3 350 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 SCAMP5Q8TAC9 235 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 UBE2FQ969M7 185 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 SLC2A13Q96QE2 648 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 LIN7BQ9HAP6 207 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 GALPQ9UBC7 116 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 PHF11Q9UIL8 331 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.34□□□□□ -1.07
DDB1-217ENST00000540166 ISM1B1AKI9 464 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 APOL3O95236 402 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 SSTR4P31391 388 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 GJA4P35212 333 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 TPMTP51580 245 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 MLLT6P55198 1093 aaPredicted RBP8.34□□□□□ -1.07
DDB1-217ENST00000540166 ZNF177Q13360 481 aaPredicted RBP8.34□□□□□ -1.07
DDB1-217ENST00000540166 PTPRCAPQ14761 206 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 DHCR24Q15392 516 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 ISCA2Q86U28 154 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 ZSWIM9Q86XI8 627 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 LAX1Q8IWV1 398 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 FAM217AQ8IXS0 508 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 PM20D2Q8IYS1 436 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 Q8N402 240 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 TMEM151AQ8N4L1 468 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 OR8K5Q8NH50 307 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 CHAC2Q8WUX2 184 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 PIH1D2Q8WWB5 315 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 ERMAPQ96PL5 475 aaPredicted RBP8.34□□□□□ -1.07
DDB1-217ENST00000540166 WACQ9BTA9 647 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 SLC25A51Q9H1U9 297 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 CRTAC1Q9NQ79 661 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 ABCC13Q9NSE7 274 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 ENOPH1Q9UHY7 261 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 SHROOM3Q8TF72 1996 aa8.34□□□□□ -1.07
DDB1-217ENST00000540166 ZFC3H1O60293 1989 aaKnown RBP8.34□□□□□ -1.08
DDB1-217ENST00000540166 A0A1W2PQH9 124 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 CIB4A0PJX0 185 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 C2orf78A6NCI8 922 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 B4DXG7 233 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 H7C2Y5 167 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 RFXANKO14593 260 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 PRAMEF12O95522 483 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 SYPP08247 313 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 LINC00271P0C7V0 271 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 STOMP27105 288 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 KCNC1P48547 511 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 LGALS3BPQ08380 585 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 HNRNPA0Q13151 305 aaKnown RBP8.34□□□□□ -1.08
DDB1-217ENST00000540166 ZBTB6Q15916 424 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 PTPRNQ16849 979 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 PLA2G4EQ3MJ16 856 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 ZNF648Q5T619 568 aaPredicted RBP8.34□□□□□ -1.08
DDB1-217ENST00000540166 KANK2Q63ZY3 851 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 BRAT1Q6PJG6 821 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 ANKRD46Q86W74 232 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 RNF130Q86XS8 419 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 TCTE3Q8IZS6 198 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 OR8K3Q8NH51 312 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 OR52J3Q8NH60 311 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 TEX37Q96LM6 180 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 ARRDC1-AS1Q9H2J1 176 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 LINC00597Q9H2U6 94 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms