RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 MAPK6Q16659 721 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 PNLIPRP3Q17RR3 467 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 PDLIM3Q53GG5 364 aaPredicted RBP3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 C6orf10Q5SRN2 563 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 LRRC66Q68CR7 880 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 PRR27Q6MZM9 219 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 C8orf74Q6P047 294 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 LRRC8BQ6P9F7 803 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 TMEM65Q6PI78 240 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 PRSS55Q6UWB4 352 aaPredicted RBP3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 DHRS13Q6UX07 377 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 DLK2Q6UY11 383 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 RHOUQ7L0Q8 258 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 SLC16A9Q7RTY1 509 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 MDGA2Q7Z553 956 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 MRPL10Q7Z7H8 261 aaKnown RBP3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 ASPGQ86U10 573 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 KATNAL2Q8IYT4 538 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 C1orf87Q8N0U7 546 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 GCNT2Q8N0V5 402 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 LRRC75A-AS1Q8N1F1 130 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 ZNF611Q8N823 705 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 CPEB3Q8NE35 698 aaKnown RBP3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 MYCBPAPQ8TBZ2 947 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 ADAMTS14Q8WXS8 1223 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 ANKRD7Q92527 254 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 MOB3AQ96BX8 217 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 ZC3HAV1LQ96H79 300 aaKnown RBP3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 C4orf36Q96KX1 117 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 ZNF48Q96MX3 618 aaPredicted RBP3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 RPRD1AQ96P16 312 aaPredicted RBP3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 GPR78Q96P69 363 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 PANX2Q96RD6 677 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 SNX18Q96RF0 628 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 RASL10BQ96S79 203 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 MYADMQ96S97 322 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 NPY6RQ99463 290 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 DDOQ99489 341 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 FAM110AQ9BQ89 295 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 TRIM62Q9BVG3 475 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 DNTTIP1Q9H147 329 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 PIGMQ9H3S5 423 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 MED20Q9H944 212 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 APMAPQ9HDC9 416 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 YAE1D1Q9NRH1 226 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 FLRT1Q9NZU1 646 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 RHCGQ9UBD6 479 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 GAB2Q9UQC2 676 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 SIRT4Q9Y6E7 314 aaPredicted RBP3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 MYO9BQ13459 2157 aa3.6□□□□□ -1.83
AC055720.1-201ENST00000539552 FAM208AQ9UK61 1670 aaKnown RBP3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 A0A087X0K7 114 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 A0A1W2PPW3 197 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 TMEM129A0AVI4 362 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 FEZF1A0PJY2 475 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 ERICH2A1L162 156 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 TMEM8BA6NDV4 472 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 BTBD17A6NE02 478 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 OR6C75A6NL08 312 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 ANKRD30BLA7E2S9 258 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 HSPB2A8KAH6 182 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 SUPT3HB4E1H0 165 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 WASH3PC4AMC7 463 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 UBE2Q2LH0YL09 131 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 POLR1CO15160 346 aaPredicted RBP3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 YY2O15391 372 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 TSPAN1O60635 241 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 SDC3O75056 442 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 CDH16O75309 829 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 CRTAPO75718 401 aaPredicted RBP3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 NCR1O76036 304 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 TGM6O95932 706 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 MBD3O95983 291 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 APOA1P02647 267 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 ICAM1P05362 532 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 ELANEP08246 267 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 ANKRD34CP0C6C1 535 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 RRASP10301 218 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 PRPS2P11908 318 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 AKR1A1P14550 325 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 S1PR1P21453 382 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 YWHAQP27348 245 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 PIK3R1P27986 724 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 ATP5C1P36542 298 aaKnown RBP3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 STAT6P42226 847 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 GRIA1P42261 906 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 NSFP46459 744 aaKnown RBP3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 HAAOP46952 286 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 ME1P48163 572 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 SLC1A6P48664 564 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 ALDH7A1P49419 539 aaKnown RBP3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 NUMBP49757 651 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 RGS4P49798 205 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 CDK3Q00526 305 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 RHAGQ02094 409 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 SLC18A2Q05940 514 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 DMWDQ09019 674 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 XRCC4Q13426 336 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 MVPQ14764 893 aaKnown RBP3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 HSPB2Q16082 182 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms