RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 RIPOR1Q6ZS17 1223 aa10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 TMPRSS9Q7Z410 1059 aa10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 ZCCHC7Q8N3Z6 543 aaKnown RBP10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 KRTCAP2Q8N6L1 136 aa10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 NATD1Q8N6N6 113 aa10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 OR9I1Q8NGQ6 314 aa10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 OR9A4Q8NGU2 314 aa10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 OR1L3Q8NH93 324 aa10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 MCUR1Q96AQ8 359 aa10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 EXOSC8Q96B26 276 aaKnown RBP10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 MTERF3Q96E29 417 aa10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 EGLN2Q96KS0 407 aa10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 CTRCQ99895 268 aa10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 DUSP26Q9BV47 211 aa10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 NPLQ9BXD5 320 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 ACTR5Q9H9F9 607 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 IL1RL2Q9HB29 575 aa10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 GPN3Q9UHW5 284 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 ENTPD4Q9Y227 616 aa10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 ZNF780BQ9Y6R6 833 aa10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 ASCC3Q8N3C0 2202 aaKnown RBP10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 DMDP11532 3685 aa10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 MYO15AQ9UKN7 3530 aa10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 SCN3AQ9NY46 2000 aa10.11□□□□□ -0.79
TNFRSF1A-211ENST00000538363 VPS13AQ96RL7 3174 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 ARID1BQ8NFD5 2236 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 COL5A1P20908 1838 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 PTPRZ1P23471 2315 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 C1orf226A1L170 272 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 CLDN4O14493 209 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 SCAMP2O15127 329 aaKnown RBP10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 CASC3O15234 703 aaKnown RBP10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 ZNF749O43361 778 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 CHST10O43529 356 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 GALR3O60755 368 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 CBFA2T3O75081 653 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 RDH16O75452 317 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 KLK3P07288 261 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 KRT16P08779 473 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 NR2F6P10588 404 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 RNH1P13489 461 aaKnown RBP10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 FBLP22087 321 aaKnown RBP10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 TACR1P25103 407 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 NTSP30990 170 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 GPC1P35052 558 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 NOVA1P51513 510 aaKnown RBP10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 DGKQP52824 942 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 LIMK1P53667 647 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 MC1RQ01726 317 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 KLC1Q07866 573 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 FAM53BQ14153 422 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 IL11RAQ14626 422 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 PRTGQ2VWP7 1150 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 DCAF12Q5T6F0 453 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 NDUFAF5Q5TEU4 345 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 C6orf163Q5TEZ5 329 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 ARHGAP40Q5TG30 622 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 C1orf189Q5VU69 101 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 ANKRD26P1Q6NSI1 321 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 BLOC1S3Q6QNY0 202 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 C6orf89Q6UWU4 347 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 C16orf89Q6UX73 402 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 CEACAM20Q6UY09 585 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 RAB11FIP2Q7L804 512 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 UBE3DQ7Z6J8 389 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 B3GNT8Q7Z7M8 397 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 TREML1Q86YW5 311 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 TICAM1Q8IUC6 712 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 ARHGAP24Q8N264 748 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 OR7A2PQ8NGA2 310 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 ZFP28Q8NHY6 868 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 PROKR1Q8TCW9 393 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 ADAMTS18Q8TE60 1221 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 TSPEARQ8WU66 669 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 WNT2BQ93097 391 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 TM4SF18Q96CE8 201 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 KLHL29Q96CT2 875 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 RCN3Q96D15 328 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 ITCHQ96J02 903 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 TEFMQ96QE5 360 aaKnown RBP10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 NPAS2Q99743 824 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 MAPKAP1Q9BPZ7 522 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 RTKNQ9BST9 563 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 ZNF304Q9HCX3 659 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 LYRM4Q9HD34 91 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 OCIAD1Q9NX40 245 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 HCN3Q9P1Z3 774 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 SEMA5BQ9P283 1151 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 PDP2Q9P2J9 529 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 PISDQ9UG56 409 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 UTS2RQ9UKP6 389 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 LOXL2Q9Y4K0 774 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 MAU2Q9Y6X3 613 aa10.1□□□□□ -0.79
TNFRSF1A-211ENST00000538363 FAM186AA6NE01 2351 aa10.09□□□□□ -0.79
TNFRSF1A-211ENST00000538363 A0A0A6YYD5 115 aa10.09□□□□□ -0.79
TNFRSF1A-211ENST00000538363 A0A1W2PP18 115 aa10.09□□□□□ -0.79
TNFRSF1A-211ENST00000538363 GLOD5A6NK44 160 aa10.09□□□□□ -0.79
TNFRSF1A-211ENST00000538363 CAPN14A8MX76 684 aa10.09□□□□□ -0.79
TNFRSF1A-211ENST00000538363 DSCR3O14972 297 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms