RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 IRF3Q14653 427 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 LACC1Q8IV20 430 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 KBTBD8Q8NFY9 601 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 MTERF3Q96E29 417 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 COQ10AQ96MF6 247 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 CHCHD6Q9BRQ6 235 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 CENPOQ9BU64 300 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 RNF208Q9H0X6 261 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 MIEF1Q9NQG6 463 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 CCDC177Q9NQR7 707 aaPredicted RBP13.68□□□□□ -0.22
USP44-203ENST00000537435 ITM2CQ9NQX7 267 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 SACM1LQ9NTJ5 587 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 TAAR2Q9P1P5 351 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 SNX8Q9Y5X2 465 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 RECKO95980 971 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 GASTP01350 101 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 RHCEP18577 417 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 DDX6P26196 483 aaKnown RBP eCLIP13.67□□□□□ -0.22
USP44-203ENST00000537435 MAGEA8P43361 318 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 DSTNP60981 165 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 DUSP7Q16829 419 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 ARHGAP15Q53QZ3 475 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 TPRG1LQ5T0D9 272 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 TUBA3EQ6PEY2 450 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 C2orf73Q8N5S3 287 aaPredicted RBP13.67□□□□□ -0.22
USP44-203ENST00000537435 CRELD1Q96HD1 420 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 IL17FQ96PD4 163 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 ROGDIQ9GZN7 287 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 NXF2Q9GZY0 626 aaKnown RBP13.67□□□□□ -0.22
USP44-203ENST00000537435 CXorf36Q9H7Y0 433 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 NMNAT1Q9HAN9 279 aaPredicted RBP13.67□□□□□ -0.22
USP44-203ENST00000537435 IFT52Q9Y366 437 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 A3GALT2U3KPV4 340 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 HELZP42694 1942 aaKnown RBP13.67□□□□□ -0.22
USP44-203ENST00000537435 ISPDA4D126 451 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 PSMD11O00231 422 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 RHOP08100 348 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 ADRA2AP08913 450 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 CHMP24386 653 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 PIK3CBP42338 1070 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 TMED10P49755 219 aaKnown RBP13.67□□□□□ -0.22
USP44-203ENST00000537435 SEPHS1P49903 392 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 DGKEP52429 567 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 PRMT2P55345 433 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 RAET1GQ6H3X3 334 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 KLHL17Q6TDP4 642 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 NCCRP1Q6ZVX7 275 aaPredicted RBP13.67□□□□□ -0.22
USP44-203ENST00000537435 VN1R5Q7Z5H4 357 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 TAGAPQ8N103 731 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 HCAR2Q8TDS4 363 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 MAPKAP1Q9BPZ7 522 aa13.67□□□□□ -0.22
USP44-203ENST00000537435 ZCCHC2Q9C0B9 1178 aaKnown RBP13.67□□□□□ -0.22
USP44-203ENST00000537435 CCDC59Q9P031 241 aaKnown RBP13.67□□□□□ -0.22
USP44-203ENST00000537435 FAM227AF5H4B4 570 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 SPINT1O43278 529 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 IFNW1P05000 195 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 CSF2RAP15509 400 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 UQCRC2P22695 453 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 SERPINB1P30740 379 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 GPR1P46091 355 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 LIMK1P53667 647 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 EPHA5P54756 1037 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 OLR1P78380 273 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 NFE2L1Q14494 772 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 ARHGEF6Q15052 776 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 ZNF181Q2M3W8 571 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 RPS26P11Q5JNZ5 115 aaPredicted RBP13.66□□□□□ -0.22
USP44-203ENST00000537435 STEAP3Q658P3 488 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 UNC5DQ6UXZ4 953 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 ZNF367Q7RTV3 350 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 POC5Q8NA72 575 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 HTRA1Q92743 480 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 Q96MT0 163 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 OR5M11Q96RB7 305 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 NLNQ9BYT8 704 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 SP140LQ9H930 580 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 FTSJ1Q9UET6 329 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 ENOPH1Q9UHY7 261 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 PLAGL1Q9UM63 463 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 SAGE2PA6NJ88 616 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 ZAR1LA6NP61 321 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 ZW10O43264 779 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 POP7O75817 140 aaKnown RBP13.66□□□□□ -0.22
USP44-203ENST00000537435 ACRP10323 421 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 PTPN2P17706 415 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 POU1F1P28069 291 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 S100A5P33763 92 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 CNR2P34972 360 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 CRISP1P54107 249 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 RPS26P62854 115 aaKnown RBP13.66□□□□□ -0.22
USP44-203ENST00000537435 NTHL1P78549 312 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 CDC20Q12834 499 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 PUM1Q14671 1186 aaKnown RBP eCLIP13.66□□□□□ -0.22
USP44-203ENST00000537435 MED22Q15528 200 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 PRAMEF14Q5SWL7 426 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 PRAMEF13Q5VWM6 474 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 FRMPD2BQ6IN97 320 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 TMIGD1Q6UXZ0 262 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 CEACAM20Q6UY09 585 aa13.66□□□□□ -0.22
USP44-203ENST00000537435 PTCHD4Q6ZW05 846 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms