RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 ACAT2Q9BWD1 397 aa11.15□□□□□ -0.62
CHRNB1-202ENST00000536404 SLC29A3Q9BZD2 475 aa11.15□□□□□ -0.62
CHRNB1-202ENST00000536404 MMP27Q9H306 513 aa11.15□□□□□ -0.62
CHRNB1-202ENST00000536404 ATP13A3Q9H7F0 1226 aa11.15□□□□□ -0.62
CHRNB1-202ENST00000536404 C1orf109Q9NX04 203 aa11.15□□□□□ -0.62
CHRNB1-202ENST00000536404 TRPS1Q9UHF7 1281 aa11.15□□□□□ -0.62
CHRNB1-202ENST00000536404 ZNF225Q9UK10 706 aa11.15□□□□□ -0.62
CHRNB1-202ENST00000536404 RPS6KA6Q9UK32 745 aa11.15□□□□□ -0.62
CHRNB1-202ENST00000536404 DGKBQ9Y6T7 804 aa11.15□□□□□ -0.62
CHRNB1-202ENST00000536404 PLXNB3Q9ULL4 1909 aa11.15□□□□□ -0.62
CHRNB1-202ENST00000536404 PLXNA2O75051 1894 aa11.15□□□□□ -0.63
CHRNB1-202ENST00000536404 ANKRD11Q6UB99 2663 aaPredicted RBP11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 A0A096LPI6 279 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 A0A1B0GVM2 712 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 LRRC72A6NJI9 287 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 C10orf142B7Z368 130 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 STX7O15400 261 aaKnown RBP11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 FLRT2O43155 660 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 INMTO95050 263 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 CCNDBP1O95273 360 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 TSPAN12O95859 305 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 TRAPPC2P0DI81 140 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 TRAPPC2BP0DI82 140 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 PRDX3P30048 256 aaKnown RBP11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 ETV1P50549 477 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 MLLT10P55197 1068 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 ABHD18Q0P651 414 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 COX10Q12887 443 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 ABRQ12979 859 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 ZNF177Q13360 481 aaPredicted RBP11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 ERICH5Q6P6B1 374 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 ENPP6Q6UWR7 440 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 SLC22A16Q86VW1 577 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 MFSD4AQ8N468 514 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 OR4F6Q8NGB9 312 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 OR14C36Q8NHC7 312 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 DYNC2LI1Q8TCX1 351 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 GIMAP5Q96F15 307 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 C19orf43Q9BQ61 176 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 SERHL2Q9H4I8 314 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 PDFQ9HBH1 243 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 TOR4AQ9NXH8 423 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 VAPAQ9P0L0 249 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 FZD4Q9ULV1 537 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 USP22Q9UPT9 525 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 MAN2B2Q9Y2E5 1009 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 MED16Q9Y2X0 877 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 DHRS7Q9Y394 339 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 OR51B4Q9Y5P0 310 aa11.14□□□□□ -0.63
CHRNB1-202ENST00000536404 FAM208BQ5VWN6 2430 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 A0A1B0GTL3 188 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 LINC00854A0A1B0GVQ3 168 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 INSIG1O15503 277 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 NOBOXO60393 691 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 DFNA5O60443 496 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 ADH1BP00325 375 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 PGRP06401 933 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 EBLN1P0CF75 366 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 PRPS2P11908 318 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 FPR1P21462 350 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 C5AR1P21730 350 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 ACVR2AP27037 513 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 DRD3P35462 400 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 SOX11P35716 441 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 PIGAP37287 484 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 NNMTP40261 264 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 MAGEA2P43356 314 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 OR3A3P47888 321 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 CCR5P51681 352 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 ADPRHP54922 357 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 PPP2CBP62714 309 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 RPL38P63173 70 aaKnown RBP11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 RACK1P63244 317 aaKnown RBP11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 PPP2CAP67775 309 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 SLC35A2P78381 396 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 GALK2Q01415 458 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 DPY19L1Q2PZI1 675 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 POM121L1PQ3SYA9 428 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 ZFP69Q49AA0 526 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 PAGE2BQ5JRK9 111 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 LRIF1Q5T3J3 769 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 LYPLAL1Q5VWZ2 237 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 LETMD1Q6P1Q0 360 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 TRIM46Q7Z4K8 759 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 TSPYL5Q86VY4 417 aaPredicted RBP11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 CALHM3Q86XJ0 350 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 MARCH9Q86YJ5 346 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 SIDT2Q8NBJ9 832 aaKnown RBP11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 OR10Z1Q8NGY1 313 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 RHOXF1Q8NHV9 184 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 EEF1AKMT1Q8WVE0 214 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 MAGEB10Q96LZ2 347 aaPredicted RBP11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 CDC6Q99741 560 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 ACTL8Q9H568 366 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 CLMPQ9H6B4 373 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 IPPKQ9H8X2 491 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms