RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 GAL3ST3Q96A11 431 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 NEURL3Q96EH8 262 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 NRBF2Q96F24 287 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 TRAPPC9Q96Q05 1148 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 C17orf62Q9BQA9 187 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 GPR174Q9BXC1 333 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 PRDM9Q9NQV7 894 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 C1GALT1Q9NS00 363 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 WNT16Q9UBV4 365 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 ANGPT4Q9Y264 503 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 EIF4E1BA6NMX2 242 aaKnown RBP12.74□□□□□ -0.37
BEST1-208ENST00000534553 C2orf74A8MZ97 194 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 TMPRSS11DO60235 418 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 H6PDO95479 791 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 EFNA1P20827 205 aaPredicted RBP12.74□□□□□ -0.37
BEST1-208ENST00000534553 ZNF10P21506 573 aaPredicted RBP12.74□□□□□ -0.37
BEST1-208ENST00000534553 NTSP30990 170 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 ANXA11P50995 505 aaKnown RBP12.74□□□□□ -0.37
BEST1-208ENST00000534553 UBE2IP63279 158 aaKnown RBP12.74□□□□□ -0.37
BEST1-208ENST00000534553 HYAL2Q12891 473 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 PRRT3Q5FWE3 981 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 TMEM31Q5JXX7 168 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 NDUFAF5Q5TEU4 345 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 SAXO2Q658L1 398 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 MRM1Q6IN84 353 aaKnown RBP12.74□□□□□ -0.37
BEST1-208ENST00000534553 BHLHB9Q6PI77 547 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 STK32CQ86UX6 486 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 IQCHQ86VS3 1027 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 METTL25Q8N6Q8 603 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 CADM4Q8NFZ8 388 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 CCL4L1Q8NHW4 92 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 KLHDC7BQ96G42 594 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 TEFMQ96QE5 360 aaKnown RBP12.74□□□□□ -0.37
BEST1-208ENST00000534553 DOHHQ9BU89 302 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 CPNE7Q9UBL6 633 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 RAPGEFL1Q9UHV5 662 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 C3orf18Q9UK00 162 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 COLQQ9Y215 455 aaPredicted RBP12.74□□□□□ -0.37
BEST1-208ENST00000534553 MYRFQ9Y2G1 1151 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 PADI2Q9Y2J8 665 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 ORC6Q9Y5N6 252 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 AK5Q9Y6K8 562 aa12.74□□□□□ -0.37
BEST1-208ENST00000534553 BTN3A3O00478 584 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 SCAMP1O15126 338 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 VILLO15195 856 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 THRBP10828 461 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 CTSEP14091 401 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 STARD6P59095 220 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 SELENOWP63302 87 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 MYBPC1Q00872 1141 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 SCARB2Q14108 478 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 GPR18Q14330 331 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 GK3PQ14409 553 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 TOR1AIP1Q5JTV8 583 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 TTC23Q5W5X9 447 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 OR2T5Q6IEZ7 315 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 PTCRAQ6ISU1 281 aaPredicted RBP12.73□□□□□ -0.37
BEST1-208ENST00000534553 SHQ1Q6PI26 577 aaKnown RBP12.73□□□□□ -0.37
BEST1-208ENST00000534553 TMEM64Q6YI46 380 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 PATL1Q86TB9 770 aaKnown RBP12.73□□□□□ -0.37
BEST1-208ENST00000534553 ASPGQ86U10 573 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 SAMD14Q8IZD0 417 aaPredicted RBP12.73□□□□□ -0.37
BEST1-208ENST00000534553 ACOT4Q8N9L9 421 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 OR2T29Q8NH02 315 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 RSC1A1Q92681 617 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 MOAP1Q96BY2 351 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 RMND5BQ96G75 393 aaPredicted RBP12.73□□□□□ -0.37
BEST1-208ENST00000534553 HSH2DQ96JZ2 352 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 DPH2Q9BQC3 489 aaPredicted RBP12.73□□□□□ -0.37
BEST1-208ENST00000534553 YTHDF1Q9BYJ9 559 aaKnown RBP12.73□□□□□ -0.37
BEST1-208ENST00000534553 GABARAPL1Q9H0R8 117 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 EPS8L2Q9H6S3 715 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 LTB4R2Q9NPC1 389 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 PRDM7Q9NQW5 492 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 GPATCH2Q9NW75 528 aa12.73□□□□□ -0.37
BEST1-208ENST00000534553 PNMA8BQ9ULN7 279 aaPredicted RBP12.73□□□□□ -0.37
BEST1-208ENST00000534553 IGHV1OR15-9A0A0B4J2B8 117 aa12.72□□□□□ -0.37
BEST1-208ENST00000534553 PRAMEF33A0A0G2JMD5 474 aa12.72□□□□□ -0.37
BEST1-208ENST00000534553 TMEM247A6NEH6 219 aa12.72□□□□□ -0.37
BEST1-208ENST00000534553 CLPTM1O96005 669 aa12.72□□□□□ -0.37
BEST1-208ENST00000534553 ARAFP10398 606 aa12.72□□□□□ -0.37
BEST1-208ENST00000534553 ETFAP13804 333 aa12.72□□□□□ -0.37
BEST1-208ENST00000534553 ATP5A1P25705 553 aaKnown RBP12.72□□□□□ -0.37
BEST1-208ENST00000534553 DCTP40126 519 aa12.72□□□□□ -0.37
BEST1-208ENST00000534553 RAD23AP54725 363 aa12.72□□□□□ -0.37
BEST1-208ENST00000534553 ITGA1P56199 1179 aa12.72□□□□□ -0.37
BEST1-208ENST00000534553 DSTNP60981 165 aa12.72□□□□□ -0.37
BEST1-208ENST00000534553 PPP2R2BQ00005 443 aa12.72□□□□□ -0.37
BEST1-208ENST00000534553 CDK6Q00534 326 aa12.72□□□□□ -0.37
BEST1-208ENST00000534553 EIF2B5Q13144 721 aaKnown RBP12.72□□□□□ -0.37
BEST1-208ENST00000534553 FZD2Q14332 565 aa12.72□□□□□ -0.37
BEST1-208ENST00000534553 SUZ12Q15022 739 aaKnown RBP12.72□□□□□ -0.37
BEST1-208ENST00000534553 CCDC85BQ15834 202 aaPredicted RBP12.72□□□□□ -0.37
BEST1-208ENST00000534553 KCTD21Q4G0X4 260 aa12.72□□□□□ -0.37
BEST1-208ENST00000534553 CYBRD1Q53TN4 286 aa12.72□□□□□ -0.37
BEST1-208ENST00000534553 CRB2Q5IJ48 1285 aa12.72□□□□□ -0.37
BEST1-208ENST00000534553 MANEAQ5SRI9 462 aa12.72□□□□□ -0.37
BEST1-208ENST00000534553 OTUD3Q5T2D3 398 aaPredicted RBP12.72□□□□□ -0.37
BEST1-208ENST00000534553 RNF130Q86XS8 419 aa12.72□□□□□ -0.37
BEST1-208ENST00000534553 ZC3H7AQ8IWR0 971 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms