RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 ZNF616Q08AN1 781 aa6.73□□□□□ -1.33
TGFBR3-210ENST00000533089 EEF1DP3Q658K8 133 aa6.73□□□□□ -1.33
TGFBR3-210ENST00000533089 RHBDF2Q6PJF5 856 aa6.73□□□□□ -1.33
TGFBR3-210ENST00000533089 TMEM161BQ8NDZ6 487 aa6.73□□□□□ -1.33
TGFBR3-210ENST00000533089 SUN3Q8TAQ9 357 aa6.73□□□□□ -1.33
TGFBR3-210ENST00000533089 NDRG1Q92597 394 aaKnown RBP6.73□□□□□ -1.33
TGFBR3-210ENST00000533089 FBXW5Q969U6 566 aa6.73□□□□□ -1.33
TGFBR3-210ENST00000533089 SLC7A6OSQ96CW6 309 aaPredicted RBP6.73□□□□□ -1.33
TGFBR3-210ENST00000533089 PTPN18Q99952 460 aa6.73□□□□□ -1.33
TGFBR3-210ENST00000533089 NMUR1Q9HB89 426 aa6.73□□□□□ -1.33
TGFBR3-210ENST00000533089 RNF186Q9NXI6 227 aa6.73□□□□□ -1.33
TGFBR3-210ENST00000533089 FLRT1Q9NZU1 646 aa6.73□□□□□ -1.33
TGFBR3-210ENST00000533089 COPS7AQ9UBW8 275 aa6.73□□□□□ -1.33
TGFBR3-210ENST00000533089 LAMB4A4D0S4 1761 aa6.73□□□□□ -1.33
TGFBR3-210ENST00000533089 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 SOWAHBA6NEL2 793 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 ADRB1P08588 477 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 CD9P21926 228 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 L1CAMP32004 1257 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 FABP6P51161 128 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 VSX2P58304 361 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 TLE2Q04725 743 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 RIN1Q13671 783 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 NCEH1Q6PIU2 408 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 NAPRTQ6XQN6 538 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 ZNF704Q6ZNC4 412 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 KCTD9Q7L273 389 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 MARCH9Q86YJ5 346 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 DEFB119Q8N690 84 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 TIFAQ96CG3 184 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 HSD17B14Q9BPX1 270 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 MRPL57Q9BQC6 102 aaKnown RBP6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 AGO3Q9H9G7 860 aaKnown RBP6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 COL20A1Q9P218 1284 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 DNAJB9Q9UBS3 223 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 ADAM18Q9Y3Q7 739 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 ZFP37Q9Y6Q3 630 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 DCDC2BA2VCK2 349 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 LCHNA4D1U4 455 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 hCG_2039718K7EN88 272 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 RNF225M0QZC1 329 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 RAP2AP10114 183 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 SAGP10523 405 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 RPL22P35268 128 aaKnown RBP6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 NUDT6P53370 316 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 PRR5P85299 388 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 CAP1Q01518 475 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 PDZK1IP1Q13113 114 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 CAMK2BQ13554 666 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 GPR19Q15760 415 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 ZDHHC20Q5W0Z9 365 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 KDELC1Q6UW63 502 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 ABHD15Q6UXT9 468 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 ZNF781Q8N8C0 355 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 FAM46DQ8NEK8 389 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 OR2A12Q8NGT7 310 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 OR52J3Q8NH60 311 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 PAQR8Q8TEZ7 354 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 LCN9Q8WX39 176 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 C14orf79Q96F83 325 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 MEGF10Q96KG7 1140 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 BTN2A3PQ96KV6 586 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 SLC2A9Q9NRM0 540 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 VAPAQ9P0L0 249 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 FBXW2Q9UKT8 454 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 CYP8B1Q9UNU6 501 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 TRAFD1O14545 582 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 UBFD1O14562 309 aaKnown RBP6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 ALOX15BO15296 676 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 MPZL2O60487 215 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 ZNF780AO75290 641 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 SULT1C4O75897 302 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 PIGRP01833 764 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 PLA2G16P53816 162 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 TNFRSF17Q02223 184 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 COX15Q7KZN9 410 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 PRSS42Q7Z5A4 293 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 RASGRP3Q8IV61 690 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 RASGEF1CQ8N431 466 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 GLB1L3Q8NCI6 653 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 TSEN15Q8WW01 171 aaKnown RBP6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 HMGB4Q8WW32 186 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 TAPBPLQ9BX59 468 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 SLC38A1Q9H2H9 487 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 PRO1933Q9H354 126 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 DUSP22Q9NRW4 184 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 SLC22A11Q9NSA0 550 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 EXTL2Q9UBQ6 330 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 RAI2Q9Y5P3 530 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 HSBP1L1C9JCN9 74 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 LIASO43766 372 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 PIP5K1CO60331 668 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 PLGP00747 810 aaPredicted RBP6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 ADAP00813 363 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 TRBC1P01850 177 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 HRGP04196 525 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 PCSK6P29122 969 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 WNT3AP56704 352 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 GTF2BQ00403 316 aa6.72□□□□□ -1.33
TGFBR3-210ENST00000533089 KIAA0141Q14154 515 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms