RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 URADA6NGE7 173 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 ADAMDEC1O15204 470 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 KIF1CO43896 1103 aaKnown RBP14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 PDE9AO76083 593 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 RASGRP1O95267 797 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 PGM3O95394 542 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 ITGAMP11215 1152 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 ETFAP13804 333 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 HIST1H1TP22492 207 aaPredicted RBP14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 IGFBP4P22692 258 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 SOAT1P35610 550 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 ALDH9A1P49189 494 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 DSTNP60981 165 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 ESRRGP62508 458 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 KCNJ10P78508 379 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 EEF1A2Q05639 463 aaKnown RBP14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 SLC5A12Q1EHB4 618 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 IFI44LQ53G44 452 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 FOXB2Q5VYV0 432 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 REEP3Q6NUK4 255 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 ABHD17CQ6PCB6 329 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 ZNF852Q6ZMS4 543 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 Q6ZSR6 202 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 SYT13Q7L8C5 426 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 PAQR7Q86WK9 346 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 RNF130Q86XS8 419 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 DCP2Q8IU60 420 aaKnown RBP14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 ARMC8Q8IUR7 673 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 OR4E2Q8NGC2 313 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 NT5CQ8TCD5 201 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 GPBAR1Q8TDU6 330 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 HMGB4Q8WW32 186 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 MOAP1Q96BY2 351 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 SORBS1Q9BX66 1292 aaKnown RBP14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 TRIM4Q9C037 500 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 TOR3AQ9H497 397 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 A4GALTQ9NPC4 353 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 PRDM9Q9NQV7 894 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 POT1Q9NUX5 634 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 ZNF624Q9P2J8 865 aaPredicted RBP14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 RAPGEFL1Q9UHV5 662 aa14.05□□□□□ -0.16
ECHDC1-220ENST00000528402 KIR2DS5A0A0G2JLQ3 304 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 A0A0G2JNG1 304 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 A6NCN8 305 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 A8MVJ9 347 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 H3BQ06 376 aaPredicted RBP14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 KIR2DS3K7RE56 304 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 RTCAO00442 366 aaKnown RBP14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 HAT1O14929 419 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 ZW10O43264 779 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 TMPRSS11DO60235 418 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 HS6ST1O60243 411 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 ZNF217O75362 1048 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 SERPIND1P05546 499 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 GNAO1P09471 354 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 NUDT7P0C024 238 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 ATP6V1B1P15313 513 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 NTSP30990 170 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 RYKP34925 604 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 SLC19A1P41440 591 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 ALDH3B2P48448 385 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 RGS1Q08116 209 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 KIR2DS5Q14953 304 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 LRIT3Q3SXY7 679 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 MRM1Q6IN84 353 aaKnown RBP14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 TMEM64Q6YI46 380 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 RD3Q7Z3Z2 195 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 SATL1Q86VE3 508 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 RBM12BQ8IXT5 1001 aaKnown RBP14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 SETD9Q8NE22 299 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 RASSF5Q8WWW0 418 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 TSACCQ96A04 125 aaPredicted RBP14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 C7orf34Q96L11 122 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 YIPF3Q9GZM5 350 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 TMEM168Q9H0V1 697 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 ING2Q9H160 280 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 SMURF2Q9HAU4 748 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 SLC35C2Q9NQQ7 365 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 PRDM7Q9NQW5 492 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 THSD1Q9NS62 852 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 SEMA3GQ9NS98 782 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 EBF1Q9UH73 591 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 BLOC1S6Q9UL45 172 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 PSME2Q9UL46 239 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 COMMD3-BMI1R4GMX3 469 aa14.04□□□□□ -0.16
ECHDC1-220ENST00000528402 SHISA7A6NL88 538 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 C5orf58C9J3I9 102 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 M0QX08 132 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 VILLO15195 856 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 JRKO75564 520 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 C9P02748 559 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 ATP5A1P25705 553 aaKnown RBP14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 AK4P27144 223 aaPredicted RBP14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 PEBP1P30086 187 aaKnown RBP14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 BLKP51451 505 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 PLA2G16P53816 162 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 TPD52P55327 224 aaPredicted RBP14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 PCBP3P57721 371 aaKnown RBP14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 VLDLRP98155 873 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 HYAL2Q12891 473 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms