RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 LIMS1P48059 325 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 HMGA2P52926 109 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 C21orf58P58505 322 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 SNRPGP62308 76 aaKnown RBP14.04□□□□□ -0.16
CAPN1-214ENST00000528165 CHRNA6Q15825 494 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 TOR2AQ5JU69 321 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 DENND1CQ8IV53 801 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 Q8N402 240 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 SLC16A10Q8TF71 515 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 ZC3HAV1LQ96H79 300 aaKnown RBP14.04□□□□□ -0.16
CAPN1-214ENST00000528165 FAM193BQ96PV7 902 aaPredicted RBP14.04□□□□□ -0.16
CAPN1-214ENST00000528165 ARHGAP39Q9C0H5 1083 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 NLKQ9UBE8 527 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 PADI3Q9ULW8 664 aa14.04□□□□□ -0.16
CAPN1-214ENST00000528165 TRBV5-4A0A0C4DH59 114 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 SMIM30A4D0T7 59 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 TSC22D2O75157 780 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 IFNA14P01570 189 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 APEX1P27695 318 aaKnown RBP14.03□□□□□ -0.16
CAPN1-214ENST00000528165 SDC2P34741 201 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 SLC6A12P48065 614 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 HNMTP50135 292 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 MAPK12P53778 367 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 RRAS2P62070 204 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-214ENST00000528165 IRF8Q02556 426 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 ELOAQ14241 798 aaKnown RBP14.03□□□□□ -0.16
CAPN1-214ENST00000528165 ATXN7L2Q5T6C5 722 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-214ENST00000528165 USP30Q70CQ3 517 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 C16orf59Q7L2K0 433 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 DDX53Q86TM3 631 aaKnown RBP14.03□□□□□ -0.16
CAPN1-214ENST00000528165 C1orf52Q8N6N3 182 aaKnown RBP14.03□□□□□ -0.16
CAPN1-214ENST00000528165 SEPT5Q99719 369 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-214ENST00000528165 SLC23A1Q9UHI7 598 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 TEX51A0A1B0GUA7 166 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 WASHC1A8K0Z3 465 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 TNFRSF21O75509 655 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 CHRM5P08912 532 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-214ENST00000528165 POLR2CP19387 275 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-214ENST00000528165 ASMTP46597 345 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 ZNF91Q05481 1191 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 PAQR6Q6TCH4 344 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 HJURPQ8NCD3 748 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-214ENST00000528165 DUSP18Q8NEJ0 188 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 OR8H1Q8NGG4 311 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 MAGEB10Q96LZ2 347 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-214ENST00000528165 KCTD7Q96MP8 289 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 GFM1Q96RP9 751 aaKnown RBP14.03□□□□□ -0.16
CAPN1-214ENST00000528165 SLC12A9Q9BXP2 914 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 NMRK2Q9NPI5 230 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 ADARB2Q9NS39 739 aaKnown RBP14.03□□□□□ -0.16
CAPN1-214ENST00000528165 LHX3Q9UBR4 397 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 ENPP4Q9Y6X5 453 aa14.03□□□□□ -0.16
CAPN1-214ENST00000528165 PRAMEF33A0A0G2JMD5 474 aa14.02□□□□□ -0.16
CAPN1-214ENST00000528165 ORC5O43913 435 aa14.02□□□□□ -0.16
CAPN1-214ENST00000528165 PRAMEF10O60809 474 aa14.02□□□□□ -0.16
CAPN1-214ENST00000528165 ANXA4P09525 319 aaPredicted RBP14.02□□□□□ -0.16
CAPN1-214ENST00000528165 SGSHP51688 502 aa14.02□□□□□ -0.16
CAPN1-214ENST00000528165 PURAQ00577 322 aaKnown RBP14.02□□□□□ -0.16
CAPN1-214ENST00000528165 HSPA14Q0VDF9 509 aa14.02□□□□□ -0.16
CAPN1-214ENST00000528165 LEXMQ3ZCV2 418 aa14.02□□□□□ -0.16
CAPN1-214ENST00000528165 CASP12Q6UXS9 341 aa14.02□□□□□ -0.16
CAPN1-214ENST00000528165 ZNF598Q86UK7 904 aaKnown RBP14.02□□□□□ -0.16
CAPN1-214ENST00000528165 NXPE1Q8N323 547 aa14.02□□□□□ -0.16
CAPN1-214ENST00000528165 ZBED6CLQ96FA7 236 aaPredicted RBP14.02□□□□□ -0.16
CAPN1-214ENST00000528165 HYLS1Q96M11 299 aa14.02□□□□□ -0.16
CAPN1-214ENST00000528165 ADAM2Q99965 735 aa14.02□□□□□ -0.16
CAPN1-214ENST00000528165 ATG10Q9H0Y0 220 aa14.02□□□□□ -0.16
CAPN1-214ENST00000528165 PAK6Q9NQU5 681 aaPredicted RBP14.02□□□□□ -0.16
CAPN1-214ENST00000528165 NUP50Q9UKX7 468 aa14.02□□□□□ -0.16
CAPN1-214ENST00000528165 ARRDC5A6NEK1 342 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 MGAT4DA6NG13 374 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 FAM227AF5H4B4 570 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 LYRM1O43325 122 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 SH3BGRLO75368 114 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 SOX14O95416 240 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 CLDN7O95471 211 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 CD160O95971 181 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 C8GP07360 202 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 ACADMP11310 421 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 BPIP17213 487 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 RHCEP18577 417 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 INPP1P49441 399 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 RAB25P57735 213 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 RBBP4Q09028 425 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 ZNF628Q5EBL2 1059 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 ZNF852Q6ZMS4 543 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 GLRX5Q86SX6 157 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 DNAJA4Q8WW22 397 aaPredicted RBP14.02□□□□□ -0.17
CAPN1-214ENST00000528165 UPRTQ96BW1 309 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 MTERF3Q96E29 417 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 QRFPRQ96P65 431 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 TSSK6Q9BXA6 273 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 GPATCH2Q9NW75 528 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 COMMD3Q9UBI1 195 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 MALT1Q9UDY8 824 aa14.02□□□□□ -0.17
CAPN1-214ENST00000528165 FCF1Q9Y324 198 aaKnown RBP14.02□□□□□ -0.17
CAPN1-214ENST00000528165 ALPK3Q96L96 1907 aa14.01□□□□□ -0.17
CAPN1-214ENST00000528165 A0A1B0GVM2 712 aa14.01□□□□□ -0.17
CAPN1-214ENST00000528165 H3BN98 237 aa14.01□□□□□ -0.17
CAPN1-214ENST00000528165 CDK2AP1O14519 115 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms