RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 DAPP1Q9UN19 280 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 MMACHCQ9Y4U1 282 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 NBASA2RRP1 2371 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 TRAV17A0A0B4J275 112 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 CLEC18AA5D8T8 446 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 OR5H15A6NDH6 313 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 GOLGA8RI6L899 631 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 MYO1DO94832 1006 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 SBK3P0C264 359 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 TSPAN8P19075 237 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 SERPINB1P30740 379 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 SSR2P43308 183 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 RAP1GDS1P52306 607 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 HSD17B7P56937 341 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 TAS2R50P59544 299 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 ID2Q02363 134 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 ZRSR2Q15696 482 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 MEP1AQ16819 746 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 TMEM35AQ53FP2 167 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 DEPDC1Q5TB30 811 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 FHL5Q5TD97 284 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 OR4C11Q6IEV9 310 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 CLEC18BQ6UXF7 455 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 CLEC18CQ8NCF0 446 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 SRFBP1Q8NEF9 429 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 OR52B6Q8NGF0 335 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 ELP5Q8TE02 316 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 SREK1Q8WXA9 508 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 MRPL57Q9BQC6 102 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 ROGDIQ9GZN7 287 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 MRPL46Q9H2W6 279 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 L2HGDHQ9H9P8 463 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 SEMA4BQ9NPR2 832 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 DMRT3Q9NQL9 472 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 TMEM216Q9P0N5 145 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 TBK1Q9UHD2 729 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 MRPS33Q9Y291 106 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 PCDHGA11Q9Y5H2 935 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 CLDN16Q9Y5I7 305 aa12.02□□□□□ -0.49
TRAPPC4-205ENST00000525079 SPENQ96T58 3664 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 ANKUB1A6NFN9 424 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 GABRR3A8MPY1 467 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 FOXO6A8MYZ6 492 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 H0YIV9 168 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 STX16-NPEPL1H3BU86 382 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 STX16O14662 325 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 PRAMEF2O60811 474 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 CTNSO60931 367 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 LDB3O75112 727 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 SEMA7AO75326 666 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 CLDN9O95484 217 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 SHBGP04278 402 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 IFNA16P05015 189 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 HIST1H1TP22492 207 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 CPN2P22792 545 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 CD96P40200 585 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 PIK3CBP42338 1070 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 CCNG1P51959 295 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 SLAMF1Q13291 335 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 TUBA3CQ13748 450 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 FAM219BQ5XKK7 198 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 SPINK14Q6IE38 97 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 RPUSD3Q6P087 351 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 TUBA3EQ6PEY2 450 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 FAM180AQ6UWF9 173 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 TIFABQ6ZNK6 161 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 RPS19BP1Q86WX3 136 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 ZNF595Q8IYB9 648 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 TMEM151AQ8N4L1 468 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 SLC5A8Q8N695 610 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 L3MBTL4Q8NA19 623 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 SUN3Q8TAQ9 357 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 ADAMTS18Q8TE60 1221 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 THAP3Q8WTV1 239 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 FAR1Q8WVX9 515 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 RGMAQ96B86 450 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 MTBPQ96DY7 904 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 SIGLEC12Q96PQ1 595 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 TAAR6Q96RI8 345 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 BARD1Q99728 777 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 UTP23Q9BRU9 249 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 HES7Q9BYE0 225 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 ALOXE3Q9BYJ1 711 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 RNF32Q9H0A6 362 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 ZBTB26Q9HCK0 441 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 LYRM4Q9HD34 91 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 KLHL1Q9NR64 748 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 ABI3Q9P2A4 366 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 ADGRE2Q9UHX3 823 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 PCTPQ9UKL6 214 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 TMCO1Q9UM00 188 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 FLNCQ14315 2725 aa12.01□□□□□ -0.49
TRAPPC4-205ENST00000525079 TRBV11-1A0A0K0K1C0 115 aa12□□□□□ -0.49
TRAPPC4-205ENST00000525079 IQANK1A0A1B0GTG1 560 aa12□□□□□ -0.49
TRAPPC4-205ENST00000525079 A0A1B0GTL3 188 aa12□□□□□ -0.49
TRAPPC4-205ENST00000525079 A8MT66 165 aa12□□□□□ -0.49
TRAPPC4-205ENST00000525079 PPP6CO00743 305 aa12□□□□□ -0.49
TRAPPC4-205ENST00000525079 PLPP1O14494 284 aa12□□□□□ -0.49
TRAPPC4-205ENST00000525079 AGFG2O95081 481 aa12□□□□□ -0.49
TRAPPC4-205ENST00000525079 ETHE1O95571 254 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms