RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-225	ENST00000524141	PRAMEF25	A6NGN4	478 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	POLR1C	O15160	346 aa	Predicted RBP	9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	CPNE3	O75131	537 aa	Known RBP	9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	GAST	P01350	101 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	C1QB	P02746	253 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	CKMT1A	P12532	417 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	OSM	P13725	252 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	CD22	P20273	847 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	NUDT1	P36639	197 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	CSNK1D	P48730	415 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	SLC9A3	P48764	834 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	RAE1	P78406	368 aa	Known RBP	9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	HNRNPA0	Q13151	305 aa	Known RBP	9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	ILK	Q13418	452 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	EFR3A	Q14156	821 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	DOC2B	Q14184	412 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	GPR19	Q15760	415 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	PYDC2	Q56P42	97 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	CEP78	Q5JTW2	689 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	ZNF648	Q5T619	568 aa	Predicted RBP	9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	RETSAT	Q6NUM9	610 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	MZT2B	Q6NZ67	158 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	CASP12	Q6UXS9	341 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	FAM109A	Q8N4B1	249 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	CAMKK1	Q8N5S9	505 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	GPR26	Q8NDV2	337 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	OR8J1	Q8NGP2	316 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	ASIC4	Q96FT7	647 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	IL4I1	Q96RQ9	567 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	LYSMD1	Q96S90	227 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	MED18	Q9BUE0	208 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	MKRN2	Q9H000	416 aa	Known RBP	9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	ATG10	Q9H0Y0	220 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	ANKRA2	Q9H9E1	313 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	GPBP1L1	Q9HC44	474 aa	Predicted RBP	9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	C11orf16	Q9NQ32	467 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	GPATCH2	Q9NW75	528 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	WDR70	Q9NW82	654 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	ING3	Q9NXR8	418 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	ATP6V1H	Q9UI12	483 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	KCND3	Q9UK17	655 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	TMCC3	Q9ULS5	477 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141	DNAH12	Q6ZR08	3092 aa		9.82	□□□□□ -0.84
SPIDR-225	ENST00000524141		A0A0B4J293	547 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	C2orf78	A6NCI8	922 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	ZNF840P	A6NDX5	716 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141		H7C4K7	107 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	ICMT	O60725	284 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	TBL1X	O60907	577 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	HBQ1	P09105	142 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	TIA1	P31483	386 aa	Known RBP eCLIP	9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	RPL3	P39023	403 aa	Known RBP	9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	KIR2DL3	P43628	341 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	HBA1	P69905	142 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	NKX3-2	P78367	333 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	B4GALNT1	Q00973	533 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	DOC2A	Q14183	400 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	GANAB	Q14697	944 aa	Known RBP	9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	ZDHHC20	Q5W0Z9	365 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	ZNF770	Q6IQ21	691 aa	Predicted RBP	9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	RFPL4B	Q6ZWI9	263 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	CREB3L2	Q70SY1	520 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	C11orf74	Q86VG3	221 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	ELMOD2	Q8IZ81	293 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	NLGN2	Q8NFZ4	835 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	REPS1	Q96D71	796 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	RNF31	Q96EP0	1072 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	TRMT61A	Q96FX7	289 aa	Known RBP	9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	C2orf49	Q9BVC5	232 aa	Predicted RBP	9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	BEX2	Q9BXY8	128 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	UCK2	Q9BZX2	261 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	MIXL1	Q9H2W2	232 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	TXNL4B	Q9NX01	149 aa	Known RBP	9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	GULP1	Q9UBP9	304 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	CLEC2D	Q9UHP7	191 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	OR51B4	Q9Y5P0	310 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	AP2A2	O94973	939 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	HLA-DQB1	P01920	261 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	IRF1	P10914	325 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	M6PR	P20645	277 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	SERPINA4	P29622	427 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	MAP2K3	P46734	347 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	OR3A3	P47888	321 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	PCBP3	P57721	371 aa	Known RBP	9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	MXD1	Q05195	221 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	ZNF91	Q05481	1191 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	EEF1A2	Q05639	463 aa	Known RBP	9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	CDH18	Q13634	790 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	TATDN3	Q17R31	274 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	ATP13A5	Q4VNC0	1218 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	FAM26D	Q5JW98	314 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	TRIQK	Q629K1	86 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	RGMB	Q6NW40	437 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	THOC6	Q86W42	341 aa	Known RBP	9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	TRIM48	Q8IWZ4	208 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	YIPF7	Q8N8F6	280 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	C19orf18	Q8NEA5	215 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	SNAPC3	Q92966	411 aa		9.81	□□□□□ -0.84
SPIDR-225	ENST00000524141	KCTD7	Q96MP8	289 aa		9.81	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms