RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 ANPEPP15144 967 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 MYOGP15173 224 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 ZNF18P17022 549 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 PKLRP30613 574 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 NT5C2P49902 561 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 BTG1P62324 171 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 GALK2Q01415 458 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 GABPAQ06546 454 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 C17orf67Q0P5P2 114 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 AP1B1Q10567 949 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 ZNF177Q13360 481 aaPredicted RBP3.34□□□□□ -1.87
SKP1-212ENST00000523966 GIT2Q14161 759 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 C3AR1Q16581 482 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 MOGAT2Q3SYC2 334 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 PLPP4Q5VZY2 271 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 FAAP20Q6NZ36 180 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 Q6ZRP5 223 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 NLRP14Q86W24 1093 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 OR10G7Q8NGN6 311 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 ATP8B4Q8TF62 1192 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 HAS2Q92819 552 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 FAM46BQ96A09 425 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 PDLIM5Q96HC4 596 aaKnown RBP3.34□□□□□ -1.87
SKP1-212ENST00000523966 DDX50Q9BQ39 737 aaKnown RBP3.34□□□□□ -1.87
SKP1-212ENST00000523966 DBNDD1Q9H9R9 158 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 NDE1Q9NXR1 346 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 THEGQ9P2T0 379 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 ERRFI1Q9UJM3 462 aaPredicted RBP3.34□□□□□ -1.87
SKP1-212ENST00000523966 GRIN2AQ12879 1464 aa3.34□□□□□ -1.88
SKP1-212ENST00000523966 ADAMTS12P58397 1594 aa3.34□□□□□ -1.88
SKP1-212ENST00000523966 PBRM1Q86U86 1689 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 NPIPB9F8W1W9 429 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 H0YIG0 161 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 B4GAT1O43505 415 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 LRCH4O75427 683 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 FGF19O95750 216 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 ODC1P11926 461 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 DPEP1P16444 411 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 STMN1P16949 149 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 GFPT1Q06210 699 aaPredicted RBP3.33□□□□□ -1.88
SKP1-212ENST00000523966 GPR50Q13585 617 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 SPHARQ15513 63 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 TRADDQ15628 312 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 MRGPRG-AS1Q2M3A8 158 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 MS4A18Q3C1V0 323 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 DDI2Q5TDH0 399 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 ZC2HC1BQ5TFG8 222 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 CYP4V2Q6ZWL3 525 aaPredicted RBP3.33□□□□□ -1.88
SKP1-212ENST00000523966 CATSPERDQ86XM0 798 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 PEX5LQ8IYB4 626 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 FBXW8Q8N3Y1 598 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 ARL10Q8N8L6 244 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 CLEC1AQ8NC01 280 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 CCDC197Q8NCU1 140 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 TRPV3Q8NET8 790 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 TCP11Q8WWU5 503 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 PRCCQ92733 491 aaPredicted RBP3.33□□□□□ -1.88
SKP1-212ENST00000523966 BCL2L2Q92843 193 aaPredicted RBP3.33□□□□□ -1.88
SKP1-212ENST00000523966 ATXN7L3BQ96GX2 97 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 POM121L2Q96KW2 1035 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 NAP1L3Q99457 506 aaPredicted RBP3.33□□□□□ -1.88
SKP1-212ENST00000523966 LGMNQ99538 433 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 OVOL2Q9BRP0 275 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 SYT11Q9BT88 431 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 ACPTQ9BZG2 426 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 ABCG4Q9H172 646 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 SP140LQ9H930 580 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 MED17Q9NVC6 651 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 MIS18AQ9NYP9 233 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 NUDT4Q9NZJ9 180 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 HMG20BQ9P0W2 317 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 TDRKHQ9Y2W6 561 aaKnown RBP3.33□□□□□ -1.88
SKP1-212ENST00000523966 SH3GLB1Q9Y371 365 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 NEDD4P46934 1319 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 UMODL1Q5DID0 1318 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 NUP160Q12769 1436 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 CASKIN1Q8WXD9 1431 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 UGGT2Q9NYU1 1516 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 EIF4G3O43432 1585 aaKnown RBP3.33□□□□□ -1.88
SKP1-212ENST00000523966 IQGAP2Q13576 1575 aa3.33□□□□□ -1.88
SKP1-212ENST00000523966 SLC15A5A6NIM6 579 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 ASB14A6NK59 587 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 MPTX1A8MV57 137 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 LMO7DNF2Z398 122 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 K7EQD1 137 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 RNF103O00237 685 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 TRAFD1O14545 582 aaPredicted RBP3.32□□□□□ -1.88
SKP1-212ENST00000523966 OGTO15294 1046 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 TNFSF12O43508 249 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 EPOP01588 193 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 CHRNGP07510 517 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 SFTPBP07988 381 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 ZSCAN5DPP0CG00 497 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 ADORA3P0DMS8 318 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 UGT1A4P22310 534 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 GJB2P29033 226 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 PPP2R1AP30153 589 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 CLK1P49759 484 aaKnown RBP3.32□□□□□ -1.88
SKP1-212ENST00000523966 LUMP51884 338 aaPredicted RBP3.32□□□□□ -1.88
SKP1-212ENST00000523966 UCP2P55851 309 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms