RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 AGTRAPQ6RW13 159 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 HSDL2Q6YN16 418 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 PRUNE1Q86TP1 453 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 SCUBE1Q8IWY4 988 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 CA13Q8N1Q1 262 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 NEIL3Q8TAT5 605 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 NT5CQ8TCD5 201 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 ATG4AQ8WYN0 398 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 MFSD3Q96ES6 412 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 SGCZQ96LD1 299 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 SECISBP2Q96T21 854 aaKnown RBP9.67□□□□□ -0.86
CLDND1-231ENST00000515620 TCF12Q99081 682 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 WDR83Q9BRX9 315 aaKnown RBP9.67□□□□□ -0.86
CLDND1-231ENST00000515620 UBTD1Q9HAC8 227 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 ADAP2Q9NPF8 381 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 ZNF148Q9UQR1 794 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 EIF3LQ9Y262 564 aaKnown RBP9.67□□□□□ -0.86
CLDND1-231ENST00000515620 C15orf38-AP3S2A0A0A6YYH1 394 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 TCRBV7S2A1N4TA0A589 114 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 TRBC2A0A5B9 178 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 MBD3L4A6NDZ8 208 aaPredicted RBP9.66□□□□□ -0.86
CLDND1-231ENST00000515620 MBD3L5A6NJ08 208 aaPredicted RBP9.66□□□□□ -0.86
CLDND1-231ENST00000515620 LRRC3CA6NJW4 275 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 AHRRA9YTQ3 701 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 C4orf51C9J302 202 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 GOLGA6L22H0YM25 854 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 NRDCO43847 1150 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 ZNF354AO60765 605 aaPredicted RBP9.66□□□□□ -0.86
CLDND1-231ENST00000515620 ENO3P13929 434 aaPredicted RBP9.66□□□□□ -0.86
CLDND1-231ENST00000515620 OGNP20774 298 aaKnown RBP9.66□□□□□ -0.86
CLDND1-231ENST00000515620 KCNJ2P63252 427 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 KLF1Q13351 362 aaPredicted RBP9.66□□□□□ -0.86
CLDND1-231ENST00000515620 PHKG1Q16816 387 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 LCE2DQ5TA82 110 aaPredicted RBP9.66□□□□□ -0.86
CLDND1-231ENST00000515620 PRAMEF20Q5VT98 475 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 PODNL1Q6PEZ8 512 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 OPN5Q6U736 354 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 LCTLQ6UWM7 567 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 CYHR1Q6ZMK1 362 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 CLNKQ7Z7G1 428 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 CPNE9Q8IYJ1 553 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 TBC1D19Q8N5T2 526 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 ZNF321PQ8N8H1 164 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 ISL2Q96A47 359 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 RBM24Q9BX46 236 aaKnown RBP9.66□□□□□ -0.86
CLDND1-231ENST00000515620 SGPP1Q9BX95 441 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 IL22Q9GZX6 179 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 SPNS1Q9H2V7 528 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 KLHL31Q9H511 634 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 CLK4Q9HAZ1 481 aaKnown RBP9.66□□□□□ -0.86
CLDND1-231ENST00000515620 PRTFDC1Q9NRG1 225 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 GALNT8Q9NY28 637 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 ADAMTS6Q9UKP5 1117 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 BOKQ9UMX3 212 aaPredicted RBP9.66□□□□□ -0.86
CLDND1-231ENST00000515620 CLDN16Q9Y5I7 305 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 NPFFR2Q9Y5X5 522 aa9.66□□□□□ -0.86
CLDND1-231ENST00000515620 MYOCOSA0A1B0GUC4 107 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 CTAGE15A4D2H0 777 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 CLDN4O14493 209 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 CASKO14936 926 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 IFNA2P01563 188 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 IFNA16P05015 189 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 ETS1P14921 441 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 NPPBP16860 134 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 CCND1P24385 295 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 CTSSP25774 331 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 OPRM1P35372 400 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 CPA2P48052 419 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 HNRNPFP52597 415 aaKnown RBP9.65□□□□□ -0.86
CLDND1-231ENST00000515620 NAP1L1P55209 391 aaKnown RBP9.65□□□□□ -0.86
CLDND1-231ENST00000515620 CCZ1BP86790 482 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 CCZ1P86791 482 aaPredicted RBP9.65□□□□□ -0.86
CLDND1-231ENST00000515620 KRTAP1-1Q07627 177 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 CRYZQ08257 329 aaKnown RBP9.65□□□□□ -0.86
CLDND1-231ENST00000515620 DMTNQ08495 405 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 ELAVL1Q15717 326 aaKnown RBP9.65□□□□□ -0.86
CLDND1-231ENST00000515620 CAVIN1Q6NZI2 390 aaKnown RBP9.65□□□□□ -0.86
CLDND1-231ENST00000515620 ADGRD1Q6QNK2 874 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 CENPUQ71F23 418 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 STRA8Q7Z7C7 330 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 LUZP2Q86TE4 346 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 CTAGE6Q86UF2 777 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 CILP2Q8IUL8 1156 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 LRRC25Q8N386 305 aaPredicted RBP9.65□□□□□ -0.86
CLDND1-231ENST00000515620 TMEM132CQ8N3T6 1108 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 TC2NQ8N9U0 490 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 FAM47BQ8NA70 645 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 TMEM52Q8NDY8 209 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 ABHD11Q8NFV4 315 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 CD200R1Q8TD46 325 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 PYCR2Q96C36 320 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 JSRP1Q96MG2 331 aaPredicted RBP9.65□□□□□ -0.86
CLDND1-231ENST00000515620 TRIB1Q96RU8 372 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 GPR21Q99679 349 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 HAUS8Q9BT25 410 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 OR8D2Q9GZM6 311 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 CCDC68Q9H2F9 335 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 ZFP64Q9NPA5 681 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 ACKR4Q9NPB9 350 aa9.65□□□□□ -0.86
CLDND1-231ENST00000515620 HOMER3Q9NSC5 361 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms