RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	PDGFRA	P16234	1089 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	SLC1A6	P48664	564 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	LYZ	P61626	148 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	ECSCR	Q19T08	205 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	C1orf141	Q5JVX7	400 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	RFPL4B	Q6ZWI9	263 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402		Q71RC1	249 aa	Predicted RBP	3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	SPATA21	Q7Z572	469 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	HIPK1	Q86Z02	1210 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	TBC1D10C	Q8IV04	446 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	ELMOD1	Q8N336	334 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	RFT1	Q96AA3	541 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	VMP1	Q96GC9	406 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	ERO1A	Q96HE7	468 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	ANKRD27	Q96NW4	1050 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	BAG1	Q99933	345 aa	Predicted RBP	3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	SLITRK2	Q9H156	845 aa		3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	CFDP1	Q9UEE9	299 aa	Predicted RBP	3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	NOCT	Q9UK39	431 aa	Known RBP	3.1	□□□□□ -1.91
MATR3-223	ENST00000514402	ILVBL	A1L0T0	632 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	ZNF732	B4DXR9	585 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402		H7C0S8	307 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	HCK	P08631	526 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	PSMB4	P28070	264 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	NPY4R	P50391	375 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	CAPZA1	P52907	286 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	KRT83	P78385	493 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	RBBP4	Q09028	425 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	TMEM44	Q2T9K0	475 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	HECTD3	Q5T447	861 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	FAM47E	Q6ZV65	393 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	VSIG1	Q86XK7	387 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	DZIP1	Q86YF9	867 aa	Known RBP	3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	CLEC1A	Q8NC01	280 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	KLHL30-AS1	Q8NEE0	82 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	RSPH1	Q8WYR4	309 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	RIT1	Q92963	219 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	RUNDC3B	Q96NL0	473 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	TNFRSF13C	Q96RJ3	184 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	FAM129A	Q9BZQ8	928 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	MGAT4A	Q9UM21	535 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	PCDHGA1	Q9Y5H4	931 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	SNX5	Q9Y5X3	404 aa		3.09	□□□□□ -1.91
MATR3-223	ENST00000514402	P2RX6	O15547	441 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	CLN5	O75503	358 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	GRAP2	O75791	330 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	KBTBD11	O94819	623 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	HSPA4L	O95757	839 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	PDGFB	P01127	241 aa	Predicted RBP	3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	QDPR	P09417	244 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	CTNNA1	P35221	906 aa	Known RBP	3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	MATK	P42679	507 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	BACE1	P56817	501 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	PTEN	P60484	403 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	PPP2R5C	Q13362	524 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	NHLRC3	Q5JS37	347 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	SLC10A5	Q5PT55	438 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	LIPJ	Q5W064	366 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	TMEM182	Q6ZP80	229 aa	Predicted RBP	3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	NUFIP2	Q7Z417	695 aa	Known RBP	3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	SLFN11	Q7Z7L1	901 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	SLC43A2	Q8N370	569 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	CD177	Q8N6Q3	437 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402		Q8N7P7	452 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	ARL10	Q8N8L6	244 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	PCNP	Q8WW12	178 aa	Known RBP	3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	LIPH	Q8WWY8	451 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	CDHR1	Q96JP9	859 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	RCHY1	Q96PM5	261 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	PRMT1	Q99873	361 aa	Known RBP	3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	DESI2	Q9BSY9	194 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	UBE2T	Q9NPD8	197 aa	Predicted RBP	3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	TMOD3	Q9NYL9	352 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	ABCD2	Q9UBJ2	740 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	ANAPC5	Q9UJX4	755 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	PFAS	O15067	1338 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402	SALL1	Q9NSC2	1324 aa		3.08	□□□□□ -1.92
MATR3-223	ENST00000514402		A0A1W2PQ72	361 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	FAM168B	A1KXE4	195 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	ANHX	E9PGG2	379 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	FAM86B1	E9PN63	330 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	FRAT2	O75474	233 aa	Predicted RBP	3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	FAM86B2	P0C5J1	330 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	FAM58BP	P0C7Q3	252 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	SUPT20HL2	P0C7V6	817 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	DLAT	P10515	647 aa	Known RBP	3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	KLK2	P20151	261 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	MUT	P22033	750 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	SRD5A2	P31213	254 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	CRKL	P46109	303 aa	Known RBP	3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	IER3	P46695	156 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	TRA2B	P62995	288 aa	Known RBP	3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	NAAA	Q02083	359 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	GPR50	Q13585	617 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	CYLC2	Q14093	348 aa	Predicted RBP	3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	CCL14	Q16627	93 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	ZNF776	Q68DI1	518 aa	Predicted RBP	3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	ARMCX5	Q6P1M9	558 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	C17orf107	Q6ZR85	190 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	GALNTL5	Q7Z4T8	443 aa		3.07	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 55 ms