RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 MFSD3Q96ES6 412 aa9.67□□□□□ -0.86
CLDND1-227ENST00000513452 SGCZQ96LD1 299 aa9.67□□□□□ -0.86
CLDND1-227ENST00000513452 SECISBP2Q96T21 854 aaKnown RBP9.67□□□□□ -0.86
CLDND1-227ENST00000513452 TCF12Q99081 682 aa9.67□□□□□ -0.86
CLDND1-227ENST00000513452 WDR83Q9BRX9 315 aaKnown RBP9.67□□□□□ -0.86
CLDND1-227ENST00000513452 UBTD1Q9HAC8 227 aa9.67□□□□□ -0.86
CLDND1-227ENST00000513452 ADAP2Q9NPF8 381 aa9.67□□□□□ -0.86
CLDND1-227ENST00000513452 ZNF148Q9UQR1 794 aa9.67□□□□□ -0.86
CLDND1-227ENST00000513452 EIF3LQ9Y262 564 aaKnown RBP9.67□□□□□ -0.86
CLDND1-227ENST00000513452 C15orf38-AP3S2A0A0A6YYH1 394 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 TCRBV7S2A1N4TA0A589 114 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 TRBC2A0A5B9 178 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 MBD3L4A6NDZ8 208 aaPredicted RBP9.66□□□□□ -0.86
CLDND1-227ENST00000513452 MBD3L5A6NJ08 208 aaPredicted RBP9.66□□□□□ -0.86
CLDND1-227ENST00000513452 LRRC3CA6NJW4 275 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 AHRRA9YTQ3 701 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 C4orf51C9J302 202 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 GOLGA6L22H0YM25 854 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 NRDCO43847 1150 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 ZNF354AO60765 605 aaPredicted RBP9.66□□□□□ -0.86
CLDND1-227ENST00000513452 ENO3P13929 434 aaPredicted RBP9.66□□□□□ -0.86
CLDND1-227ENST00000513452 OGNP20774 298 aaKnown RBP9.66□□□□□ -0.86
CLDND1-227ENST00000513452 KCNJ2P63252 427 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 KLF1Q13351 362 aaPredicted RBP9.66□□□□□ -0.86
CLDND1-227ENST00000513452 PHKG1Q16816 387 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 PRAMEF20Q5VT98 475 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 PODNL1Q6PEZ8 512 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 OPN5Q6U736 354 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 LCTLQ6UWM7 567 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 CYHR1Q6ZMK1 362 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 CLNKQ7Z7G1 428 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 CPNE9Q8IYJ1 553 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 TBC1D19Q8N5T2 526 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 ZNF321PQ8N8H1 164 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 ISL2Q96A47 359 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 RBM24Q9BX46 236 aaKnown RBP9.66□□□□□ -0.86
CLDND1-227ENST00000513452 SGPP1Q9BX95 441 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 IL22Q9GZX6 179 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 SPNS1Q9H2V7 528 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 KLHL31Q9H511 634 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 CLK4Q9HAZ1 481 aaKnown RBP9.66□□□□□ -0.86
CLDND1-227ENST00000513452 PRTFDC1Q9NRG1 225 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 GALNT8Q9NY28 637 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 ADAMTS6Q9UKP5 1117 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 BOKQ9UMX3 212 aaPredicted RBP9.66□□□□□ -0.86
CLDND1-227ENST00000513452 CLDN16Q9Y5I7 305 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 NPFFR2Q9Y5X5 522 aa9.66□□□□□ -0.86
CLDND1-227ENST00000513452 MYOCOSA0A1B0GUC4 107 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 CTAGE15A4D2H0 777 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 CLDN4O14493 209 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 CASKO14936 926 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 IFNA2P01563 188 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 IFNA16P05015 189 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 ETS1P14921 441 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 NPPBP16860 134 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 CCND1P24385 295 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 CTSSP25774 331 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 OPRM1P35372 400 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 CPA2P48052 419 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 HNRNPFP52597 415 aaKnown RBP9.65□□□□□ -0.86
CLDND1-227ENST00000513452 NAP1L1P55209 391 aaKnown RBP9.65□□□□□ -0.86
CLDND1-227ENST00000513452 CCZ1BP86790 482 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 CCZ1P86791 482 aaPredicted RBP9.65□□□□□ -0.86
CLDND1-227ENST00000513452 KRTAP1-1Q07627 177 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 CRYZQ08257 329 aaKnown RBP9.65□□□□□ -0.86
CLDND1-227ENST00000513452 DMTNQ08495 405 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 ELAVL1Q15717 326 aaKnown RBP9.65□□□□□ -0.86
CLDND1-227ENST00000513452 CAVIN1Q6NZI2 390 aaKnown RBP9.65□□□□□ -0.86
CLDND1-227ENST00000513452 ADGRD1Q6QNK2 874 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 CENPUQ71F23 418 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 STRA8Q7Z7C7 330 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 LUZP2Q86TE4 346 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 CTAGE6Q86UF2 777 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 CILP2Q8IUL8 1156 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 LRRC25Q8N386 305 aaPredicted RBP9.65□□□□□ -0.86
CLDND1-227ENST00000513452 TMEM132CQ8N3T6 1108 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 TC2NQ8N9U0 490 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 FAM47BQ8NA70 645 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 TMEM52Q8NDY8 209 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 ABHD11Q8NFV4 315 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 CD200R1Q8TD46 325 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 PYCR2Q96C36 320 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 JSRP1Q96MG2 331 aaPredicted RBP9.65□□□□□ -0.86
CLDND1-227ENST00000513452 TRIB1Q96RU8 372 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 GPR21Q99679 349 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 HAUS8Q9BT25 410 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 OR8D2Q9GZM6 311 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 CCDC68Q9H2F9 335 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 ZFP64Q9NPA5 681 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 ACKR4Q9NPB9 350 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 HOMER3Q9NSC5 361 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 SYBUQ9NX95 663 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 JKAMPQ9P055 326 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 C6orf203Q9P0P8 240 aaPredicted RBP9.65□□□□□ -0.86
CLDND1-227ENST00000513452 ZFP69BQ9UJL9 534 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 CAMK2AQ9UQM7 478 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 PDE10AQ9Y233 779 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 MED16Q9Y2X0 877 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 PCDHA13Q9Y5I0 950 aa9.65□□□□□ -0.86
CLDND1-227ENST00000513452 CLCA3PQ9Y6N3 262 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms