RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 MGME1Q9BQP7 344 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 TINAGL1Q9GZM7 467 aaPredicted RBP3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 NOD2Q9HC29 1040 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 RASSF1Q9NS23 344 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 TXLNGQ9NUQ3 528 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 HAUS2Q9NVX0 235 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 TAS2R14Q9NYV8 317 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 NFKBIL1Q9UBC1 381 aaPredicted RBP3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 AMACRQ9UHK6 382 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 SLC24A2Q9UI40 661 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 TEKT2Q9UIF3 430 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 SH3BGRL2Q9UJC5 107 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 TINAGQ9UJW2 476 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 CDC23Q9UJX2 597 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 POMT2Q9UKY4 750 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 FZD10Q9ULW2 581 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 CDYLQ9Y232 598 aa3.46□□□□□ -1.86
PDLIM5-218ENST00000513341 OR6C74A6NCV1 312 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 ASPDHA6ND91 283 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 OR5H15A6NDH6 313 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 PRSS29PA6NIE9 313 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 SIGLEC16A6NMB1 481 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 GOLGA8SH3BPF8 625 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 PSMA7O14818 248 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 TTI1O43156 1089 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 PRPSAP2O60256 369 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 CNOT3O75175 753 aaKnown RBP3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 CRLF1O75462 422 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 POP7O75817 140 aaKnown RBP3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 SLCO2B1O94956 709 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 GOSR1O95249 250 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 FGFR1OPO95684 399 aaKnown RBP3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 KITP10721 976 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 ABOP16442 354 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 DESP17661 470 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 CTPS1P17812 591 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 TNFAIP3P21580 790 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 MMP8P22894 467 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 IL4RP24394 825 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 CD86P42081 329 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 ARHGAP25P42331 645 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 KPNA2P52292 529 aaKnown RBP3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 CTSCP53634 463 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 GSCP56915 257 aaPredicted RBP3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 DCDC1P59894 354 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 TPI1P60174 286 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 DPYSQ14117 519 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 KEAP1Q14145 624 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 RBBP7Q16576 425 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 ZNF569Q5MCW4 686 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 TXNRD3NBQ6F5E7 133 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 SCYL2Q6P3W7 929 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 TRIM65Q6PJ69 517 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 WDR59Q6PJI9 974 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 PAMR1Q6UXH9 720 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 WDR53Q7Z5U6 358 aaPredicted RBP3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 CDC20BQ86Y33 519 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 ZNF547Q8IVP9 402 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 ARHGAP12Q8IWW6 846 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 PHC2Q8IXK0 858 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 LRRC75A-AS1Q8N1F1 130 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 GHDCQ8N2G8 530 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 PYROXD2Q8N2H3 581 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 CPSF7Q8N684 471 aaKnown RBP3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 TEX26Q8N6G2 289 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 POC1BQ8TC44 478 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 GPT2Q8TD30 523 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 IPCEF1Q8WWN9 437 aaPredicted RBP3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 RND1Q92730 232 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 N4BP2L2Q92802 583 aaPredicted RBP3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 GLYATL1Q969I3 302 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 NMD3Q96D46 503 aaKnown RBP3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 TTC25Q96NG3 672 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 NUP85Q9BW27 656 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 SPATA16Q9BXB7 569 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 POLR1EQ9GZS1 481 aaKnown RBP3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 LIME1Q9H400 295 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 TFB2MQ9H5Q4 396 aaKnown RBP3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 KIR3DX1Q9H7L2 352 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 BEX4Q9NWD9 120 aaPredicted RBP3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 MDFICQ9P1T7 246 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 SLC45A2Q9UMX9 530 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 DNAJC16Q9Y2G8 782 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 WDR37Q9Y2I8 494 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 HEBP2Q9Y5Z4 205 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 HS3ST3B1Q9Y662 390 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 TLN2Q9Y4G6 2542 aa3.45□□□□□ -1.86
PDLIM5-218ENST00000513341 CHD3Q12873 2000 aaKnown RBP3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 CPAMD8Q8IZJ3 1885 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 NSG1A0A0A6YYJ2 146 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 C1orf232A0A0U1RR37 186 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 BICDL2A1A5D9 508 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 MBD3L4A6NDZ8 208 aaPredicted RBP3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 MBD3L3A6NE82 208 aaPredicted RBP3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 VSTM2BA6NLU5 285 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 USP27XA6NNY8 438 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 C2orf74A8MZ97 194 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 M0QYG6 137 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms