RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 ALOX12P18054 663 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 AHRP35869 848 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 EFNA3P52797 238 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 RHAGQ02094 409 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 CSHL1Q14406 222 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 USP10Q14694 798 aaKnown RBP6.74□□□□□ -1.33
USP46-208ENST00000512656 ZNF630Q2M218 657 aaPredicted RBP6.74□□□□□ -1.33
USP46-208ENST00000512656 FCRLBQ6BAA4 426 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 SLC25A25Q6KCM7 469 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 PAQR3Q6TCH7 311 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 STRA8Q7Z7C7 330 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 GALNT7Q86SF2 657 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 RPS19BP1Q86WX3 136 aaKnown RBP6.74□□□□□ -1.33
USP46-208ENST00000512656 CRLF3Q8IUI8 442 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 AFAP1L2Q8N4X5 818 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 NAT8LQ8N9F0 302 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 MDS2Q8NDY4 140 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 ABHD11Q8NFV4 315 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 OR4K1Q8NGD4 311 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 OR56A3Q8NH54 315 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 SNF8Q96H20 258 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 PEX11GQ96HA9 241 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 GPR137Q96N19 417 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 NDNQ99608 321 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 MACROD1Q9BQ69 325 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 PPANQ9NQ55 473 aaKnown RBP6.74□□□□□ -1.33
USP46-208ENST00000512656 KLHL1Q9NR64 748 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 LANCL2Q9NS86 450 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 ASIC3Q9UHC3 531 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 SH3BGRL2Q9UJC5 107 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 CORO1CQ9ULV4 474 aaPredicted RBP6.74□□□□□ -1.33
USP46-208ENST00000512656 NEU2Q9Y3R4 380 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 HIVEP1P15822 2718 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 C2CD3Q4AC94 2353 aa6.74□□□□□ -1.33
USP46-208ENST00000512656 F8P00451 2351 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 SCN2AQ99250 2005 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 ASPDHA6ND91 283 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 OR2W5A6NFC9 320 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 ZNF860A6NHJ4 632 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 GABRR3A8MPY1 467 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 FCHO1O14526 889 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 CHST10O43529 356 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 GALR3O60755 368 aaPredicted RBP6.73□□□□□ -1.33
USP46-208ENST00000512656 CDC123O75794 336 aaPredicted RBP6.73□□□□□ -1.33
USP46-208ENST00000512656 AHSGP02765 367 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 SP1P08047 785 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 RNH1P13489 461 aaKnown RBP6.73□□□□□ -1.33
USP46-208ENST00000512656 PRF1P14222 555 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 ABOP16442 354 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 ZNF24P17028 368 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 CYB561P49447 251 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 CDKN2DP55273 166 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 SLC26A5P58743 744 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 PMP22Q01453 160 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 ILF2Q12905 390 aaKnown RBP6.73□□□□□ -1.33
USP46-208ENST00000512656 PHKG1Q16816 387 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 ZXDCQ2QGD7 858 aaPredicted RBP6.73□□□□□ -1.33
USP46-208ENST00000512656 DEFB134Q4QY38 66 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 RNASEH2BQ5TBB1 312 aaKnown RBP6.73□□□□□ -1.33
USP46-208ENST00000512656 SPINK14Q6IE38 97 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 FAM45BPQ6NSW5 357 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 MBOAT1Q6ZNC8 495 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 Q6ZPB1 254 aaPredicted RBP6.73□□□□□ -1.33
USP46-208ENST00000512656 QSOX2Q6ZRP7 698 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 GALNTL5Q7Z4T8 443 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 PDSS2Q86YH6 399 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 SPPL2CQ8IUH8 684 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 CNTN4Q8IWV2 1026 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 PDIK1LQ8N165 341 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 GHDCQ8N2G8 530 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 POGLUT1Q8NBL1 392 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 ZNF740Q8NDX6 193 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 TRPV3Q8NET8 790 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 NT5CQ8TCD5 201 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 FAM45AQ8TCE6 357 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 ACTRT1Q8TDG2 376 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 SLC5A11Q8WWX8 675 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 TSLPQ969D9 159 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 UBE2FQ969M7 185 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 TMEM125Q96AQ2 219 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 FBXL8Q96CD0 374 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 CERS2Q96G23 380 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 SCMH1Q96GD3 660 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 PDLIM5Q96HC4 596 aaKnown RBP6.73□□□□□ -1.33
USP46-208ENST00000512656 MS4A14Q96JA4 679 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 PTCHD1Q96NR3 888 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 SIGLEC12Q96PQ1 595 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 OLFM1Q99784 485 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 AIF1LQ9BQI0 150 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 CDCP1Q9H5V8 836 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 ANKRD10Q9NXR5 420 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 LRFN1Q9P244 771 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 ZFP69BQ9UJL9 534 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 SH2B3Q9UQQ2 575 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 ZNF835Q9Y2P0 537 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 VWA7Q9Y334 891 aa6.73□□□□□ -1.33
USP46-208ENST00000512656 ANKRD33BA6NCL7 494 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 SYNDIG1LA6NDD5 238 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 NPIPA5E9PKD4 350 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 CES2O00748 559 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms