RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 SLC25A25Q6KCM7 469 aa20.61■□□□□ 0.89
PACRGL-220ENST00000508952 ZNF793Q6ZN11 406 aa20.61■□□□□ 0.89
PACRGL-220ENST00000508952 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.61■□□□□ 0.89
PACRGL-220ENST00000508952 ZNF595Q8IYB9 648 aa20.61■□□□□ 0.89
PACRGL-220ENST00000508952 HORMAD2Q8N7B1 307 aa20.61■□□□□ 0.89
PACRGL-220ENST00000508952 ZNF473Q8WTR7 871 aaKnown RBP20.61■□□□□ 0.89
PACRGL-220ENST00000508952 FRMD6Q96NE9 622 aa20.61■□□□□ 0.89
PACRGL-220ENST00000508952 MS4A8Q9BY19 250 aa20.61■□□□□ 0.89
PACRGL-220ENST00000508952 SNX15Q9NRS6 342 aa20.61■□□□□ 0.89
PACRGL-220ENST00000508952 NINJ2Q9NZG7 142 aa20.61■□□□□ 0.89
PACRGL-220ENST00000508952 SH3BGRL2Q9UJC5 107 aa20.61■□□□□ 0.89
PACRGL-220ENST00000508952 ZNF223Q9UK11 482 aaPredicted RBP20.61■□□□□ 0.89
PACRGL-220ENST00000508952 DAPP1Q9UN19 280 aa20.61■□□□□ 0.89
PACRGL-220ENST00000508952 A0A087X1B8 175 aa20.6■□□□□ 0.89
PACRGL-220ENST00000508952 ASPDHA6ND91 283 aa20.6■□□□□ 0.89
PACRGL-220ENST00000508952 RTCAO00442 366 aaKnown RBP20.6■□□□□ 0.89
PACRGL-220ENST00000508952 MTHFD2P13995 350 aa20.6■□□□□ 0.89
PACRGL-220ENST00000508952 CYB561P49447 251 aa20.6■□□□□ 0.89
PACRGL-220ENST00000508952 CLCN2P51788 898 aa20.6■□□□□ 0.89
PACRGL-220ENST00000508952 ALDH6A1Q02252 535 aaKnown RBP20.6■□□□□ 0.89
PACRGL-220ENST00000508952 TERF2Q15554 542 aa20.6■□□□□ 0.89
PACRGL-220ENST00000508952 ZNF227Q86WZ6 799 aa20.6■□□□□ 0.89
PACRGL-220ENST00000508952 NCLNQ969V3 563 aa20.6■□□□□ 0.89
PACRGL-220ENST00000508952 KCNC2Q96PR1 638 aa20.6■□□□□ 0.89
PACRGL-220ENST00000508952 FBXW2Q9UKT8 454 aa20.6■□□□□ 0.89
PACRGL-220ENST00000508952 CACNA1DQ01668 2161 aa20.6■□□□□ 0.89
PACRGL-220ENST00000508952 FCHO1O14526 889 aa20.59■□□□□ 0.89
PACRGL-220ENST00000508952 NME2P1O60361 137 aa20.59■□□□□ 0.89
PACRGL-220ENST00000508952 TGFB1P01137 390 aa20.59■□□□□ 0.89
PACRGL-220ENST00000508952 NME2P22392 152 aa20.59■□□□□ 0.89
PACRGL-220ENST00000508952 TRHRP34981 398 aaPredicted RBP20.59■□□□□ 0.89
PACRGL-220ENST00000508952 HLCSP50747 726 aa20.59■□□□□ 0.89
PACRGL-220ENST00000508952 WHAMMP3Q1A5X7 153 aa20.59■□□□□ 0.89
PACRGL-220ENST00000508952 FAM83EQ2M2I3 478 aa20.59■□□□□ 0.89
PACRGL-220ENST00000508952 MED27Q6P2C8 311 aa20.59■□□□□ 0.89
PACRGL-220ENST00000508952 LAS2Q8IYD9 372 aa20.59■□□□□ 0.89
PACRGL-220ENST00000508952 ARMC10Q8N2F6 343 aa20.59■□□□□ 0.89
PACRGL-220ENST00000508952 RNF175Q8N4F7 328 aa20.59■□□□□ 0.89
PACRGL-220ENST00000508952 TEX9Q8N6V9 391 aa20.59■□□□□ 0.89
PACRGL-220ENST00000508952 OR7G3Q8NG95 312 aa20.59■□□□□ 0.89
PACRGL-220ENST00000508952 SREK1Q8WXA9 508 aaKnown RBP20.59■□□□□ 0.89
PACRGL-220ENST00000508952 UBE2E3Q969T4 207 aa20.59■□□□□ 0.89
PACRGL-220ENST00000508952 VMP1Q96GC9 406 aa20.59■□□□□ 0.89
PACRGL-220ENST00000508952 MAPKAP1Q9BPZ7 522 aa20.59■□□□□ 0.89
PACRGL-220ENST00000508952 ADAP2Q9NPF8 381 aa20.59■□□□□ 0.89
PACRGL-220ENST00000508952 KCMF1Q9P0J7 381 aa20.59■□□□□ 0.89
PACRGL-220ENST00000508952 LRRC14BA6NHZ5 514 aa20.58■□□□□ 0.89
PACRGL-220ENST00000508952 SYCE1LA8MT33 242 aa20.58■□□□□ 0.89
PACRGL-220ENST00000508952 NPIPA5E9PKD4 350 aa20.58■□□□□ 0.89
PACRGL-220ENST00000508952 SAP18O00422 153 aaKnown RBP20.58■□□□□ 0.89
PACRGL-220ENST00000508952 PRKNO60260 465 aaPredicted RBP20.58■□□□□ 0.89
PACRGL-220ENST00000508952 ALDOAP04075 364 aaKnown RBP20.58■□□□□ 0.89
PACRGL-220ENST00000508952 IFNA16P05015 189 aa20.58■□□□□ 0.89
PACRGL-220ENST00000508952 EPB42P16452 691 aa20.58■□□□□ 0.89
PACRGL-220ENST00000508952 ATP5A1P25705 553 aaKnown RBP20.58■□□□□ 0.89
PACRGL-220ENST00000508952 PHBP35232 272 aa20.58■□□□□ 0.89
PACRGL-220ENST00000508952 CA7P43166 264 aa20.58■□□□□ 0.89
PACRGL-220ENST00000508952 GPR143P51810 404 aa20.58■□□□□ 0.89
PACRGL-220ENST00000508952 DDX39BQ13838 428 aaKnown RBP20.58■□□□□ 0.89
PACRGL-220ENST00000508952 CPSF7Q8N684 471 aaKnown RBP20.58■□□□□ 0.89
PACRGL-220ENST00000508952 ACOT4Q8N9L9 421 aa20.58■□□□□ 0.89
PACRGL-220ENST00000508952 NOA1Q8NC60 698 aaKnown RBP20.58■□□□□ 0.89
PACRGL-220ENST00000508952 FAM98AQ8NCA5 519 aaKnown RBP20.58■□□□□ 0.89
PACRGL-220ENST00000508952 RHEBL1Q8TAI7 183 aa20.58■□□□□ 0.89
PACRGL-220ENST00000508952 ZNF592Q92610 1267 aa20.58■□□□□ 0.89
PACRGL-220ENST00000508952 GPR137Q96N19 417 aa20.58■□□□□ 0.89
PACRGL-220ENST00000508952 TBCDQ9BTW9 1192 aa20.58■□□□□ 0.89
PACRGL-220ENST00000508952 ACSS3Q9H6R3 686 aa20.58■□□□□ 0.89
PACRGL-220ENST00000508952 TRIM45Q9H8W5 580 aaPredicted RBP20.58■□□□□ 0.89
PACRGL-220ENST00000508952 DMGDHQ9UI17 866 aaKnown RBP20.58■□□□□ 0.89
PACRGL-220ENST00000508952 NPIPA1Q9UND3 350 aa20.58■□□□□ 0.89
PACRGL-220ENST00000508952 PPIEQ9UNP9 301 aaKnown RBP20.58■□□□□ 0.89
PACRGL-220ENST00000508952 A0A096LPK6 155 aa20.57■□□□□ 0.88
PACRGL-220ENST00000508952 CCL21O00585 134 aa20.57■□□□□ 0.88
PACRGL-220ENST00000508952 SLC19A2O60779 497 aa20.57■□□□□ 0.88
PACRGL-220ENST00000508952 CTNSO60931 367 aa20.57■□□□□ 0.88
PACRGL-220ENST00000508952 GFAPP14136 432 aa20.57■□□□□ 0.88
PACRGL-220ENST00000508952 SERPINB8P50452 374 aa20.57■□□□□ 0.88
PACRGL-220ENST00000508952 RBPJQ06330 500 aa20.57■□□□□ 0.88
PACRGL-220ENST00000508952 PCDH1Q08174 1060 aa20.57■□□□□ 0.88
PACRGL-220ENST00000508952 RCN2Q14257 317 aa20.57■□□□□ 0.88
PACRGL-220ENST00000508952 NAA30Q147X3 362 aaPredicted RBP20.57■□□□□ 0.88
PACRGL-220ENST00000508952 SETDB1Q15047 1291 aa20.57■□□□□ 0.88
PACRGL-220ENST00000508952 PFKFB4Q16877 469 aa20.57■□□□□ 0.88
PACRGL-220ENST00000508952 TMEM35AQ53FP2 167 aa20.57■□□□□ 0.88
PACRGL-220ENST00000508952 GRHL2Q6ISB3 625 aa20.57■□□□□ 0.88
PACRGL-220ENST00000508952 C16orf47Q6ZP98 133 aaPredicted RBP20.57■□□□□ 0.88
PACRGL-220ENST00000508952 CCDC91Q7Z6B0 441 aa20.57■□□□□ 0.88
PACRGL-220ENST00000508952 MYLK4Q86YV6 388 aaPredicted RBP20.57■□□□□ 0.88
PACRGL-220ENST00000508952 SIAH3Q8IW03 269 aa20.57■□□□□ 0.88
PACRGL-220ENST00000508952 SRFBP1Q8NEF9 429 aaKnown RBP20.57■□□□□ 0.88
PACRGL-220ENST00000508952 TMEM125Q96AQ2 219 aa20.57■□□□□ 0.88
PACRGL-220ENST00000508952 GPR78Q96P69 363 aa20.57■□□□□ 0.88
PACRGL-220ENST00000508952 SORBS1Q9BX66 1292 aaKnown RBP20.57■□□□□ 0.88
PACRGL-220ENST00000508952 ALOXE3Q9BYJ1 711 aa20.57■□□□□ 0.88
PACRGL-220ENST00000508952 ROGDIQ9GZN7 287 aa20.57■□□□□ 0.88
PACRGL-220ENST00000508952 OR51B5Q9H339 312 aa20.57■□□□□ 0.88
PACRGL-220ENST00000508952 LIN28AQ9H9Z2 209 aaKnown RBP20.57■□□□□ 0.88
PACRGL-220ENST00000508952 LYRM4Q9HD34 91 aa20.57■□□□□ 0.88
PACRGL-220ENST00000508952 ANGPTL3Q9Y5C1 460 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms