RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 HSF1Q00613 529 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 TGM3Q08188 693 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 LAPTM5Q13571 262 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 SLC25A35Q3KQZ1 300 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 FBXL19-AS1Q494R0 122 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 GXYLT1Q4G148 440 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 TRIM40Q6P9F5 258 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 OPN5Q6U736 354 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 HSDL2Q6YN16 418 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 RTL4Q6ZR62 310 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 GK5Q6ZS86 529 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 MDGA2Q7Z553 956 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 TMPRSS11BQ86T26 416 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 FAM109AQ8N4B1 249 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 SLC15A4Q8N697 577 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 SPC24Q8NBT2 197 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 OR52N2Q8NGI0 321 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 NCLNQ969V3 563 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 SARAFQ96BY9 339 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 RHBDF1Q96CC6 855 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 VPS39Q96JC1 886 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 PDLIM2Q96JY6 352 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 RASL10BQ96S79 203 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 FAM173AQ9BQD7 235 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 TTYH2Q9BSA4 534 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 EFCAB11Q9BUY7 163 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 TMUB1Q9BVT8 246 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 TTTY12Q9BZ98 90 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 DERL2Q9GZP9 239 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 REXO4Q9GZR2 422 aaKnown RBP5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 AICDAQ9GZX7 198 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 TSPAN10Q9H1Z9 355 aaPredicted RBP5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 KLHL31Q9H511 634 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 CNOT10Q9H9A5 744 aaKnown RBP5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 IL1RL2Q9HB29 575 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 PLAC1Q9HBJ0 212 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 SH2D2AQ9NP31 389 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 ACKR4Q9NPB9 350 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 NPDC1Q9NQX5 325 aaPredicted RBP5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 PRTFDC1Q9NRG1 225 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 DEPPQ9NTK1 212 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 HPF1Q9NWY4 346 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 MS4A12Q9NXJ0 267 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 ADGRE2Q9UHX3 823 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 FOXD3Q9UJU5 478 aaPredicted RBP5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 PPP2R2CQ9Y2T4 447 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 CLCA3PQ9Y6N3 262 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 CCDC168Q8NDH2 2452 aa5.67□□□□□ -1.5
LSM3P4-201ENST00000502948 ZFHX3Q15911 3703 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 CTAGE15A4D2H0 777 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 ANKRD33BA6NCL7 494 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 ANKDD1BA6NHY2 528 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 C4orf51C9J302 202 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 TGFBR3LH3BV60 316 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 ERI3O43414 337 aaKnown RBP5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 OR2J2O76002 312 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 GUCA1CO95843 209 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 IGKV3-11P04433 115 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 SERPIND1P05546 499 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 FOSL1P15407 271 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 PPP2R1BP30154 601 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 HNRNPH1P31943 449 aaKnown RBP5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 KCNC1P48547 511 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 LIM2P55344 173 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 RAB8AP61006 207 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 PPIAP62937 165 aaKnown RBP5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 RNF4P78317 190 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 OLR1P78380 273 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 FOLH1Q04609 750 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 FOXO1Q12778 655 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 SLC13A2Q13183 592 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 RUNX2Q13950 521 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 RBBP5Q15291 538 aaKnown RBP5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 PPP1R7Q15435 360 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 TGFBIQ15582 683 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 MSS51Q4VC12 460 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 TMEM35AQ53FP2 167 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 PAGE2BQ5JRK9 111 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 RIPPLY2Q5TAB7 128 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 ABHD17CQ6PCB6 329 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 B3GNT6Q6ZMB0 384 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 TRILQ7L0X0 811 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 CAMKMTQ7Z624 323 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 CTAGE6Q86UF2 777 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 ZC3HC1Q86WB0 502 aaKnown RBP5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 CYP4X1Q8N118 509 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 PDPRQ8NCN5 879 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 CHDHQ8NE62 594 aaPredicted RBP5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 OR2M7Q8NG81 312 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 PAQR8Q8TEZ7 354 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 PTPMT1Q8WUK0 201 aaPredicted RBP5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 ASB15Q8WXK1 588 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 UBE2E3Q969T4 207 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 ALKBH8Q96BT7 664 aaKnown RBP5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 PTCD3Q96EY7 689 aaKnown RBP5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 ART5Q96L15 291 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 KCNC2Q96PR1 638 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 OSBPL9Q96SU4 736 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 ZNF559Q9BR84 538 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms